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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180732143
ODGX01001385
283336
Actinomycetota
GGT
Thr
>WENV180732142
ODGX01001385
118279
Actinomycetota
GTA
Tyr
>WENV180732107
ODGX01000110
46667
Actinomycetota
GGA
Ser
>WENV180732146
ODGX01001442
178581
Actinomycetota
TAC
Val
>WENV180732119
ODGX01000265
134439
Actinomycetota
GTA
Tyr
>WENV180732125
ODGX01000310
281035
Actinomycetota
GTT
Asn
>WENV180732164
ODGX01002640
280944
Actinomycetota
TTC
Glu
>WENV180732120
ODGX01000265
289322
Actinomycetota
GGT
Thr
>WENV180732180
ODGX01004218
283331
Actinomycetota
CTC
Glu
>WENV180732144
ODGX01001385
399203
Actinomycetota
CAT
Met
>WENV180732135
ODGX01000787
320103
Actinomycetota
GAA
Phe
>WENV180732116
ODGX01000244
287493
Actinomycetota
>WENV180732124
ODGX01000310
184163
Actinomycetota
CAT
Met
>WENV180732191
ODGX01006005
480461
Actinomycetota
GCA
Cys
>WENV180732183
ODGX01005239
178580
Actinomycetota
GAA
Phe
>WENV180732148
ODGX01001493
342697
Actinomycetota
TGC
Ala
>WENV180732123
ODGX01000267
176353
Actinomycetota
CAA
Leu
>WENV180732179
ODGX01004218
436761
Actinomycetota
CTG
Gln
>WENV180732115
ODGX01000244
403867
Actinomycetota
CTG
Gln
>WENV180732105
ODGX01000099
280982
Actinomycetota
CTT
Lys
>WENV180732151
ODGX01001677
283932
Actinomycetota
GCC
Gly
>WENV180732099
ODGX01000027
312253
Actinomycetota
TGC
Ala
>WENV180732131
ODGX01000716
459167
Actinomycetota
TCC
Gly
>WENV180732199
ODGX01008227
46790
Actinomycetota
GAG
Leu
>WENV180732132
ODGX01000730
499385
Actinomycetota
CCC
Gly
>WENV180732114
ODGX01000237
399099
Actinomycetota
>WENV180732181
ODGX01005034
180080
Actinomycetota
GGG
Pro
>WENV180732106
ODGX01000102
339485
Actinomycetota
GGC
Ala
>WENV180732177
ODGX01003886
283335
Actinomycetota
CTT
Lys
>WENV180732139
ODGX01001072
284288
Actinomycetota
TAC
Val
>WENV180732182
ODGX01005232
100161
Actinomycetota
CAG
Leu
>WENV180732165
ODGX01002767
300986
Actinomycetota
ACG
Arg
>WENV180732104
ODGX01000064
56546
Actinomycetota
CAG
Leu
>WENV180732097
ODGX01000023
289318
Actinomycetota
GTG
His
>WENV180732147
ODGX01001472
178582
Actinomycetota
TTT
Lys
>WENV180732190
ODGX01005760
283322
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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