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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180736415
ODHB01046082
284044
Gammaproteobacteria
TTC
Glu
>WENV180735539
ODHB01000003
5699
Gammaproteobacteria
GCT
Ser
>WENV180735584
ODHB01000067
5699
Gammaproteobacteria
GCT
Ser
>WENV180735527
ODHB01000001
121754
Gammaproteobacteria
TAG
Leu
>WENV180735628
ODHB01000161
176446
Gammaproteobacteria
CAT
Met
>WENV180735571
ODHB01000040
482476
Gammaproteobacteria
CCA
Trp
>WENV180735870
ODHB01001348
178974
Gammaproteobacteria
GAC
Val
>WENV180735849
ODHB01001029
127466
Gammaproteobacteria
TAG
Leu
>WENV180736307
ODHB01021619
182344
Gammaproteobacteria
ACG
Arg
>WENV180735535
ODHB01000002
31109
Gammaproteobacteria
GGA
Ser
>WENV180735811
ODHB01000801
4148
Gammaproteobacteria
>WENV180735703
ODHB01000328
178975
Gammaproteobacteria
CTT
Lys
>WENV180735528
ODHB01000001
401175
Gammaproteobacteria
TTG
Gln
>WENV180735529
ODHB01000001
401175
Gammaproteobacteria
TTG
Gln
>WENV180736515
ODHB01140735
401175
Gammaproteobacteria
TTG
Gln
>WENV180735872
ODHB01001374
4023
Gammaproteobacteria
>WENV180735550
ODHB01000010
76276
Gammaproteobacteria
TAA
Leu
>WENV180735791
ODHB01000689
76276
Gammaproteobacteria
TAA
Leu
>WENV180735566
ODHB01000034
29761
Gammaproteobacteria
TGA
Ser
>WENV180735666
ODHB01000226
29761
Gammaproteobacteria
TGA
Ser
>WENV180735526
ODHB01000001
176541
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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