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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180745569
ODHL01000054
283336
Actinomycetota
GGT
Thr
>WENV180745643
ODHL01001402
283336
Actinomycetota
GGT
Thr
>WENV180745799
ODHL01031439
175883
Actinomycetota
GAT
Ile
>WENV180745500
ODHL01000001
178802
Actinomycetota
TAA
Leu
>WENV180745568
ODHL01000054
118279
Actinomycetota
GTA
Tyr
>WENV180745523
ODHL01000011
180084
Actinomycetota
CAT
Met
>WENV180745599
ODHL01000134
178581
Actinomycetota
TAC
Val
>WENV180745510
ODHL01000004
400421
Actinomycetota
GAC
Val
>WENV180745551
ODHL01000024
486950
Actinomycetota
CCC
Gly
>WENV180745634
ODHL01001121
486950
Actinomycetota
CCC
Gly
>WENV180745547
ODHL01000024
100162
Actinomycetota
TGA
Ser
>WENV180745686
ODHL01002997
100162
Actinomycetota
TGA
Ser
>WENV180745580
ODHL01000069
280944
Actinomycetota
TTC
Glu
>WENV180745611
ODHL01000373
283331
Actinomycetota
CTC
Glu
>WENV180745570
ODHL01000054
399203
Actinomycetota
CAT
Met
>WENV180745644
ODHL01001402
399203
Actinomycetota
CAT
Met
>WENV180745497
ODHL01000001
283323
Actinomycetota
TGT
Thr
>WENV180745582
ODHL01000069
219862
Actinomycetota
GAA
Phe
>WENV180745537
ODHL01000012
297665
Actinomycetota
ACG
Arg
>WENV180745532
ODHL01000011
284895
Actinomycetota
TCT
Arg
>WENV180745513
ODHL01000006
281146
Actinomycetota
CGC
Ala
>WENV180745563
ODHL01000044
178580
Actinomycetota
GAA
Phe
>WENV180745505
ODHL01000004
215051
Actinomycetota
GGG
Pro
>WENV180745515
ODHL01000006
400674
Actinomycetota
CTG
Gln
>WENV180745789
ODHL01028084
291585
Actinomycetota
GCC
Gly
>WENV180745555
ODHL01000026
46790
Actinomycetota
GAG
Leu
>WENV180745635
ODHL01001181
178579
Actinomycetota
GTC
Asp
>WENV180745562
ODHL01000044
178579
Actinomycetota
GTC
Asp
>WENV180745653
ODHL01001852
283329
Actinomycetota
GTG
His
>WENV180745616
ODHL01000416
283329
Actinomycetota
GTG
His
>WENV180745689
ODHL01003102
283329
Actinomycetota
GTG
His
>WENV180745494
ODHL01000001
283327
Actinomycetota
TGC
Ala
>WENV180745606
ODHL01000171
283335
Actinomycetota
CTT
Lys
>WENV180745533
ODHL01000011
293157
Actinomycetota
GTG
His
>WENV180745564
ODHL01000047
214183
Actinomycetota
CGG
Pro
>WENV180745552
ODHL01000024
100161
Actinomycetota
CAG
Leu
>WENV180745549
ODHL01000024
300986
Actinomycetota
ACG
Arg
>WENV180745550
ODHL01000024
56387
Actinomycetota
CGA
Ser
>WENV180745649
ODHL01001740
56387
Actinomycetota
CGA
Ser
>WENV180745685
ODHL01002587
56387
Actinomycetota
CGA
Ser
>WENV180745541
ODHL01000012
280979
Actinomycetota
GGT
Thr
>WENV180745581
ODHL01000069
202703
Actinomycetota
GTC
Asp
>WENV180745583
ODHL01000069
202703
Actinomycetota
GTC
Asp
>WENV180745631
ODHL01000955
220936
Actinomycetota
GAT
Ile
>WENV180745517
ODHL01000006
406385
Actinomycetota
CAC
Val
>WENV180745572
ODHL01000056
176317
Actinomycetota
GAT
Ile
>WENV180745560
ODHL01000044
178582
Actinomycetota
TTT
Lys
>WENV180745610
ODHL01000373
400420
Actinomycetota
CTG
Gln
>WENV180745587
ODHL01000087
400420
Actinomycetota
CTG
Gln
>WENV180745496
ODHL01000001
283322
Actinomycetota
CGT
Thr
>WENV180745543
ODHL01000012
284899
Actinomycetota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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