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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180764987
ODIB01009532
183770
Fusobacteriota
GAT
Ile
>WENV180765418
ODIB01163396
187804
Fusobacteriota
GTC
Asp
>WENV180765415
ODIB01163028
141145
Fusobacteriota
>WENV180765278
ODIB01065534
288879
Fusobacteriota
TAC
Val
>WENV180765417
ODIB01163396
288879
Fusobacteriota
TAC
Val
>WENV180764980
ODIB01009243
119283
Fusobacteriota
GTA
Tyr
>WENV180765225
ODIB01046754
280538
Fusobacteriota
TTT
Lys
>WENV180765047
ODIB01014783
280538
Fusobacteriota
TTT
Lys
>WENV180765136
ODIB01025766
184485
Fusobacteriota
GTC
Asp
>WENV180765409
ODIB01157700
184487
Fusobacteriota
TCT
Arg
>WENV180764988
ODIB01009532
183767
Fusobacteriota
TGC
Ala
>WENV180765419
ODIB01163445
183767
Fusobacteriota
TGC
Ala
>WENV180765227
ODIB01046754
156979
Fusobacteriota
CAT
Met
>WENV180765048
ODIB01014783
143640
Fusobacteriota
TAG
Leu
>WENV180765046
ODIB01014783
358658
Fusobacteriota
GTG
His
>WENV180765228
ODIB01046754
403663
Fusobacteriota
TTC
Glu
>WENV180765223
ODIB01046329
288877
Fusobacteriota
GTT
Asn
>WENV180764979
ODIB01009243
407549
Fusobacteriota
TTC
Glu
>WENV180765413
ODIB01162471
288878
Fusobacteriota
TGT
Thr
>WENV180765388
ODIB01135554
288878
Fusobacteriota
TGT
Thr
>WENV180764978
ODIB01009243
288878
Fusobacteriota
TGT
Thr
>WENV180765226
ODIB01046754
183769
Fusobacteriota
TCT
Arg
>WENV180765064
ODIB01016539
183773
Fusobacteriota
CCT
Arg
>WENV180765067
ODIB01016564
74687
Fusobacteriota
CAA
Leu
>WENV180765066
ODIB01016564
183772
Fusobacteriota
ACG
Arg
>WENV180764916
ODIB01005329
183768
Fusobacteriota
CAT
Met
>WENV180764915
ODIB01005329
57087
Fusobacteriota
TAA
Leu
>WENV180764989
ODIB01009532
192090
Fusobacteriota
CAT
Met
>WENV180765420
ODIB01163445
192090
Fusobacteriota
CAT
Met
>WENV180765044
ODIB01014783
183766
Fusobacteriota
TGG
Pro
>WENV180765276
ODIB01065534
288880
Fusobacteriota
CTT
Lys
>WENV180765401
ODIB01147178
404073
Fusobacteriota
TTG
Gln
>WENV180765277
ODIB01065534
403662
Fusobacteriota
TTC
Glu
>WENV180765065
ODIB01016564
228619
Fusobacteriota
TCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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