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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180777566
ODIL01018557
187804
Fusobacteriota
GTC
Asp
>WENV180777565
ODIL01018557
288879
Fusobacteriota
TAC
Val
>WENV180777675
ODIL01049791
119283
Fusobacteriota
GTA
Tyr
>WENV180777561
ODIL01018557
280538
Fusobacteriota
TTT
Lys
>WENV180777716
ODIL01060982
280538
Fusobacteriota
TTT
Lys
>WENV180777574
ODIL01019594
183767
Fusobacteriota
TGC
Ala
>WENV180777563
ODIL01018557
156979
Fusobacteriota
CAT
Met
>WENV180777572
ODIL01019594
143640
Fusobacteriota
TAG
Leu
>WENV180777715
ODIL01060982
358658
Fusobacteriota
GTG
His
>WENV180777365
ODIL01002807
288877
Fusobacteriota
GTT
Asn
>WENV180777674
ODIL01049791
407549
Fusobacteriota
TTC
Glu
>WENV180777564
ODIL01018557
407549
Fusobacteriota
TTC
Glu
>WENV180777571
ODIL01019594
288878
Fusobacteriota
TGT
Thr
>WENV180777562
ODIL01018557
183769
Fusobacteriota
TCT
Arg
>WENV180777579
ODIL01020870
183773
Fusobacteriota
CCT
Arg
>WENV180777745
ODIL01074320
183772
Fusobacteriota
ACG
Arg
>WENV180777757
ODIL01077869
202720
Fusobacteriota
TGG
Pro
>WENV180777575
ODIL01019594
192090
Fusobacteriota
CAT
Met
>WENV180777797
ODIL01107980
288880
Fusobacteriota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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