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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
124 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180778927
ODIN01000026
118433
Bacteroidota
TAG
Leu
>WENV180779068
ODIN01000385
118433
Bacteroidota
TAG
Leu
>WENV180779138
ODIN01000617
400161
Bacteroidota
GGT
Thr
>WENV180779801
ODIN01017783
211453
Bacteroidota
TCT
Arg
>WENV180778998
ODIN01000092
192166
Bacteroidota
GTT
Asn
>WENV180778902
ODIN01000015
282852
Bacteroidota
TTT
Lys
>WENV180779135
ODIN01000612
282852
Bacteroidota
TTT
Lys
>WENV180779336
ODIN01002633
282852
Bacteroidota
TTT
Lys
>WENV180779169
ODIN01000833
402390
Bacteroidota
TTC
Glu
>WENV180779077
ODIN01000412
481329
Bacteroidota
>WENV180778985
ODIN01000083
481329
Bacteroidota
>WENV180779189
ODIN01000936
406285
Bacteroidota
GGT
Thr
>WENV180779010
ODIN01000134
400949
Bacteroidota
CCT
Arg
>WENV180779071
ODIN01000399
400949
Bacteroidota
CCT
Arg
>WENV180779035
ODIN01000216
222068
Bacteroidota
GAT
Ile
>WENV180779187
ODIN01000936
120171
Bacteroidota
GTA
Tyr
>WENV180779140
ODIN01000618
120171
Bacteroidota
GTA
Tyr
>WENV180779029
ODIN01000195
481267
Bacteroidota
CTG
Gln
>WENV180779701
ODIN01012668
179464
Bacteroidota
CAT
Met
>WENV180779247
ODIN01001363
348707
Bacteroidota
TTT
Lys
>WENV180779248
ODIN01001363
348707
Bacteroidota
TTT
Lys
>WENV180779047
ODIN01000257
178571
Bacteroidota
GTT
Asn
>WENV180778999
ODIN01000093
178571
Bacteroidota
GTT
Asn
>WENV180778952
ODIN01000052
178571
Bacteroidota
GTT
Asn
>WENV180779416
ODIN01003912
292594
Bacteroidota
GGG
Pro
>WENV180779487
ODIN01005327
281190
Bacteroidota
CAT
Met
>WENV180779841
ODIN01019296
157895
Bacteroidota
TAC
Val
>WENV180779499
ODIN01005899
157895
Bacteroidota
TAC
Val
>WENV180779054
ODIN01000304
240785
Bacteroidota
GTC
Asp
>WENV180778855
ODIN01000002
178572
Bacteroidota
CAT
Met
>WENV180779000
ODIN01000094
178572
Bacteroidota
CAT
Met
>WENV180779040
ODIN01000232
178572
Bacteroidota
CAT
Met
>WENV180779522
ODIN01006208
157400
Bacteroidota
TAC
Val
>WENV180779635
ODIN01009814
172085
Bacteroidota
TAC
Val
>WENV180779631
ODIN01009663
172085
Bacteroidota
TAC
Val
>WENV180779597
ODIN01007936
172085
Bacteroidota
TAC
Val
>WENV180779463
ODIN01004912
172085
Bacteroidota
TAC
Val
>WENV180779422
ODIN01004292
172085
Bacteroidota
TAC
Val
>WENV180779356
ODIN01003111
172085
Bacteroidota
TAC
Val
>WENV180779102
ODIN01000463
172085
Bacteroidota
TAC
Val
>WENV180779075
ODIN01000412
172085
Bacteroidota
TAC
Val
>WENV180779067
ODIN01000380
172085
Bacteroidota
TAC
Val
>WENV180778986
ODIN01000083
172085
Bacteroidota
TAC
Val
>WENV180778929
ODIN01000026
172085
Bacteroidota
TAC
Val
>WENV180778928
ODIN01000026
172085
Bacteroidota
TAC
Val
>WENV180779353
ODIN01003025
56385
Bacteroidota
TGA
Ser
>WENV180779199
ODIN01000983
56385
Bacteroidota
TGA
Ser
>WENV180778940
ODIN01000042
56385
Bacteroidota
TGA
Ser
>WENV180779241
ODIN01001325
431429
Bacteroidota
CCT
Arg
>WENV180779285
ODIN01001798
30327
Bacteroidota
GCT
Ser
>WENV180779866
ODIN01021213
312035
Bacteroidota
CCA
Trp
>WENV180779481
ODIN01005221
312035
Bacteroidota
CCA
Trp
>WENV180779101
ODIN01000462
293174
Bacteroidota
CCC
Gly
>WENV180780384
ODIN01161700
242241
Bacteroidota
GTC
Asp
>WENV180780375
ODIN01155514
242241
Bacteroidota
GTC
Asp
>WENV180779417
ODIN01004065
242241
Bacteroidota
GTC
Asp
>WENV180779526
ODIN01006397
404663
Bacteroidota
GGT
Thr
>WENV180780184
ODIN01061249
400850
Bacteroidota
TTC
Glu
>WENV180779483
ODIN01005263
400850
Bacteroidota
TTC
Glu
>WENV180779997
ODIN01032128
317815
Bacteroidota
TCC
Gly
>WENV180779623
ODIN01009127
292874
Bacteroidota
GAA
Phe
>WENV180780097
ODIN01045630
175944
Bacteroidota
CAT
Met
>WENV180779332
ODIN01002573
175944
Bacteroidota
CAT
Met
>WENV180779756
ODIN01014983
175886
Bacteroidota
GGC
Ala
>WENV180778931
ODIN01000030
283315
Bacteroidota
CGT
Thr
>WENV180779164
ODIN01000781
283315
Bacteroidota
CGT
Thr
>WENV180779045
ODIN01000250
187105
Bacteroidota
CAT
Met
>WENV180778978
ODIN01000070
400815
Bacteroidota
TTC
Glu
>WENV180778939
ODIN01000038
20533
Bacteroidota
GGA
Ser
>WENV180778997
ODIN01000092
187358
Bacteroidota
GTG
His
>WENV180779031
ODIN01000207
483469
Bacteroidota
TTG
Gln
>WENV180779460
ODIN01004891
404109
Bacteroidota
CTC
Glu
>WENV180779459
ODIN01004891
404109
Bacteroidota
CTC
Glu
>WENV180779100
ODIN01000462
47445
Bacteroidota
TAA
Leu
>WENV180778856
ODIN01000002
156383
Bacteroidota
GGG
Pro
>WENV180779001
ODIN01000098
156383
Bacteroidota
GGG
Pro
>WENV180779146
ODIN01000654
147999
Bacteroidota
CAA
Leu
>WENV180779186
ODIN01000936
176809
Bacteroidota
TGT
Thr
>WENV180779924
ODIN01026857
115044
Bacteroidota
GTA
Tyr
>WENV180779036
ODIN01000216
179822
Bacteroidota
TGC
Ala
>WENV180779440
ODIN01004461
46648
Bacteroidota
TAA
Leu
>WENV180779253
ODIN01001393
46648
Bacteroidota
TAA
Leu
>WENV180779070
ODIN01000399
46648
Bacteroidota
TAA
Leu
>WENV180779021
ODIN01000171
46648
Bacteroidota
TAA
Leu
>WENV180778935
ODIN01000030
118432
Bacteroidota
CAG
Leu
>WENV180779587
ODIN01007580
280478
Bacteroidota
GCC
Gly
>WENV180779063
ODIN01000359
284236
Bacteroidota
CGG
Pro
>WENV180779120
ODIN01000588
87360
Bacteroidota
GCT
Ser
>WENV180779418
ODIN01004128
481284
Bacteroidota
CCA
Trp
>WENV180780092
ODIN01045393
187400
Bacteroidota
GTT
Asn
>WENV180780369
ODIN01154262
228511
Bacteroidota
GAT
Ile
>WENV180778895
ODIN01000011
284457
Bacteroidota
CAT
Met
>WENV180779166
ODIN01000782
284457
Bacteroidota
CAT
Met
>WENV180779190
ODIN01000945
284457
Bacteroidota
CAT
Met
>WENV180779527
ODIN01006397
372845
Bacteroidota
CCA
Trp
>WENV180779059
ODIN01000330
207889
Bacteroidota
CAT
Met
>WENV180779325
ODIN01002503
178134
Bacteroidota
TGG
Pro
>WENV180780139
ODIN01054623
331443
Bacteroidota
CGT
Thr
>WENV180778987
ODIN01000083
118220
Bacteroidota
GTA
Tyr
>WENV180779076
ODIN01000412
118220
Bacteroidota
GTA
Tyr
>WENV180779137
ODIN01000617
118220
Bacteroidota
GTA
Tyr
>WENV180780264
ODIN01091854
284313
Bacteroidota
TTT
Lys
>WENV180779020
ODIN01000168
481044
Bacteroidota
>WENV180779097
ODIN01000449
179653
Bacteroidota
GTG
His
>WENV180778979
ODIN01000071
179653
Bacteroidota
GTG
His
>WENV180779486
ODIN01005327
187426
Bacteroidota
GGC
Ala
>WENV180779022
ODIN01000179
481328
Bacteroidota
TTG
Gln
>WENV180778977
ODIN01000069
481328
Bacteroidota
TTG
Gln
>WENV180779098
ODIN01000451
361792
Bacteroidota
GAA
Phe
>WENV180779572
ODIN01007390
285750
Bacteroidota
CCC
Gly
>WENV180779466
ODIN01004986
373714
Bacteroidota
GCC
Gly
>WENV180779056
ODIN01000320
284456
Bacteroidota
CGG
Pro
>WENV180778995
ODIN01000086
284456
Bacteroidota
CGG
Pro
>WENV180778936
ODIN01000030
73509
Bacteroidota
GAG
Leu
>WENV180779454
ODIN01004704
73509
Bacteroidota
GAG
Leu
>WENV180780180
ODIN01060288
73509
Bacteroidota
GAG
Leu
>WENV180779657
ODIN01010729
157442
Bacteroidota
TAC
Val
>WENV180779249
ODIN01001363
75391
Bacteroidota
GAG
Leu
>WENV180779656
ODIN01010729
156405
Bacteroidota
TAC
Val
>WENV180779323
ODIN01002472
481045
Bacteroidota
CCC
Gly
>WENV180779165
ODIN01000781
481045
Bacteroidota
CCC
Gly
>WENV180778932
ODIN01000030
481045
Bacteroidota
CCC
Gly
>WENV180779246
ODIN01001363
293216
Bacteroidota
CTT
Lys
>WENV180779122
ODIN01000588
195454
Bacteroidota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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