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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180791519
ODIU01007685
284890
Actinomycetota
CTT
Lys
>WENV180791586
ODIU01031615
401853
Actinomycetota
GTT
Asn
>WENV180791582
ODIU01029899
284889
Actinomycetota
CTC
Glu
>WENV180791540
ODIU01013730
47453
Actinomycetota
GAG
Leu
>WENV180791550
ODIU01015407
63367
Actinomycetota
GGA
Ser
>WENV180791514
ODIU01006705
20643
Actinomycetota
GAG
Leu
>WENV180791579
ODIU01028058
180071
Actinomycetota
CAT
Met
>WENV180791576
ODIU01027502
221845
Actinomycetota
GAT
Ile
>WENV180791568
ODIU01022759
290430
Actinomycetota
TCT
Arg
>WENV180791461
ODIU01002255
124580
Actinomycetota
GTA
Tyr
>WENV180791425
ODIU01000651
187640
Actinomycetota
TGT
Thr
>WENV180791449
ODIU01001748
284887
Actinomycetota
GCC
Gly
>WENV180791560
ODIU01019338
482493
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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