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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180793753
ODIW01062983
183770
Fusobacteriota
GAT
Ile
>WENV180792779
ODIW01002238
187804
Fusobacteriota
GTC
Asp
>WENV180792963
ODIW01005097
187804
Fusobacteriota
GTC
Asp
>WENV180792970
ODIW01005097
187804
Fusobacteriota
GTC
Asp
>WENV180792776
ODIW01002238
141145
Fusobacteriota
>WENV180792778
ODIW01002238
288879
Fusobacteriota
TAC
Val
>WENV180792962
ODIW01005097
288879
Fusobacteriota
TAC
Val
>WENV180792969
ODIW01005097
288879
Fusobacteriota
TAC
Val
>WENV180792687
ODIW01001561
119283
Fusobacteriota
GTA
Tyr
>WENV180792517
ODIW01000703
289706
Fusobacteriota
GTG
His
>WENV180793124
ODIW01008646
280538
Fusobacteriota
TTT
Lys
>WENV180792772
ODIW01002238
280538
Fusobacteriota
TTT
Lys
>WENV180792313
ODIW01000248
184485
Fusobacteriota
GTC
Asp
>WENV180793754
ODIW01062983
183767
Fusobacteriota
TGC
Ala
>WENV180792973
ODIW01005097
183767
Fusobacteriota
TGC
Ala
>WENV180792774
ODIW01002238
156979
Fusobacteriota
CAT
Met
>WENV180792769
ODIW01002238
57899
Fusobacteriota
TAA
Leu
>WENV180793125
ODIW01008646
143640
Fusobacteriota
TAG
Leu
>WENV180792972
ODIW01005097
143640
Fusobacteriota
TAG
Leu
>WENV180793870
ODIW01133822
196958
Fusobacteriota
GAT
Ile
>WENV180793123
ODIW01008646
358658
Fusobacteriota
GTG
His
>WENV180793417
ODIW01020546
289707
Fusobacteriota
TTT
Lys
>WENV180792518
ODIW01000703
289707
Fusobacteriota
TTT
Lys
>WENV180792269
ODIW01000210
289707
Fusobacteriota
TTT
Lys
>WENV180793871
ODIW01133822
292614
Fusobacteriota
TGC
Ala
>WENV180793779
ODIW01077164
292614
Fusobacteriota
TGC
Ala
>WENV180792596
ODIW01000962
187240
Fusobacteriota
TCG
Arg
>WENV180793442
ODIW01022352
288877
Fusobacteriota
GTT
Asn
>WENV180792976
ODIW01005120
288877
Fusobacteriota
GTT
Asn
>WENV180792968
ODIW01005097
407549
Fusobacteriota
TTC
Glu
>WENV180792775
ODIW01002238
407549
Fusobacteriota
TTC
Glu
>WENV180792686
ODIW01001561
407549
Fusobacteriota
TTC
Glu
>WENV180792685
ODIW01001561
288878
Fusobacteriota
TGT
Thr
>WENV180792971
ODIW01005097
288878
Fusobacteriota
TGT
Thr
>WENV180792770
ODIW01002238
214188
Fusobacteriota
CAT
Met
>WENV180793384
ODIW01019018
289708
Fusobacteriota
TGT
Thr
>WENV180792356
ODIW01000290
289708
Fusobacteriota
TGT
Thr
>WENV180792773
ODIW01002238
183769
Fusobacteriota
TCT
Arg
>WENV180792965
ODIW01005097
484173
Fusobacteriota
GCA
Cys
>WENV180792991
ODIW01005457
74687
Fusobacteriota
CAA
Leu
>WENV180792990
ODIW01005457
183772
Fusobacteriota
ACG
Arg
>WENV180793121
ODIW01008646
202720
Fusobacteriota
TGG
Pro
>WENV180793523
ODIW01030053
202720
Fusobacteriota
TGG
Pro
>WENV180792974
ODIW01005097
192090
Fusobacteriota
CAT
Met
>WENV180792967
ODIW01005097
288880
Fusobacteriota
CTT
Lys
>WENV180792835
ODIW01002668
47168
Fusobacteriota
GCT
Ser
>WENV180793008
ODIW01005854
404073
Fusobacteriota
TTG
Gln
>WENV180792406
ODIW01000397
404073
Fusobacteriota
TTG
Gln
>WENV180792354
ODIW01000283
404073
Fusobacteriota
TTG
Gln
>WENV180793845
ODIW01112175
228619
Fusobacteriota
TCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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