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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180816825
ODJP01066731
183770
Fusobacteriota
GAT
Ile
>WENV180816223
ODJP01006559
187804
Fusobacteriota
GTC
Asp
>WENV180816230
ODJP01006559
187804
Fusobacteriota
GTC
Asp
>WENV180815941
ODJP01002816
141145
Fusobacteriota
>WENV180816222
ODJP01006559
288879
Fusobacteriota
TAC
Val
>WENV180816229
ODJP01006559
288879
Fusobacteriota
TAC
Val
>WENV180816396
ODJP01012227
119283
Fusobacteriota
GTA
Tyr
>WENV180816897
ODJP01099434
289706
Fusobacteriota
GTG
His
>WENV180815937
ODJP01002816
280538
Fusobacteriota
TTT
Lys
>WENV180815568
ODJP01000759
280538
Fusobacteriota
TTT
Lys
>WENV180816507
ODJP01019160
184485
Fusobacteriota
GTC
Asp
>WENV180816364
ODJP01010797
184485
Fusobacteriota
GTC
Asp
>WENV180816243
ODJP01006705
184485
Fusobacteriota
GTC
Asp
>WENV180815545
ODJP01000689
184485
Fusobacteriota
GTC
Asp
>WENV180816826
ODJP01066731
183767
Fusobacteriota
TGC
Ala
>WENV180816233
ODJP01006559
183767
Fusobacteriota
TGC
Ala
>WENV180815939
ODJP01002816
156979
Fusobacteriota
CAT
Met
>WENV180815934
ODJP01002816
57899
Fusobacteriota
TAA
Leu
>WENV180816232
ODJP01006559
143640
Fusobacteriota
TAG
Leu
>WENV180815569
ODJP01000759
143640
Fusobacteriota
TAG
Leu
>WENV180816930
ODJP01123878
196958
Fusobacteriota
GAT
Ile
>WENV180815567
ODJP01000759
358658
Fusobacteriota
GTG
His
>WENV180816898
ODJP01099434
289707
Fusobacteriota
TTT
Lys
>WENV180815586
ODJP01000796
289707
Fusobacteriota
TTT
Lys
>WENV180816931
ODJP01123878
292614
Fusobacteriota
TGC
Ala
>WENV180815857
ODJP01002159
187240
Fusobacteriota
TCG
Arg
>WENV180816458
ODJP01015356
288877
Fusobacteriota
GTT
Asn
>WENV180816395
ODJP01012227
407549
Fusobacteriota
TTC
Glu
>WENV180816228
ODJP01006559
407549
Fusobacteriota
TTC
Glu
>WENV180816394
ODJP01012227
288878
Fusobacteriota
TGT
Thr
>WENV180816231
ODJP01006559
288878
Fusobacteriota
TGT
Thr
>WENV180815935
ODJP01002816
214188
Fusobacteriota
CAT
Met
>WENV180816971
ODJP01135327
289708
Fusobacteriota
TGT
Thr
>WENV180816286
ODJP01007710
289708
Fusobacteriota
TGT
Thr
>WENV180816043
ODJP01003769
289708
Fusobacteriota
TGT
Thr
>WENV180815938
ODJP01002816
183769
Fusobacteriota
TCT
Arg
>WENV180816225
ODJP01006559
484173
Fusobacteriota
GCA
Cys
>WENV180815458
ODJP01000464
74687
Fusobacteriota
CAA
Leu
>WENV180815457
ODJP01000464
183772
Fusobacteriota
ACG
Arg
>WENV180815544
ODJP01000689
289709
Fusobacteriota
TAC
Val
>WENV180816506
ODJP01019160
289709
Fusobacteriota
TAC
Val
>WENV180816461
ODJP01015814
202720
Fusobacteriota
TGG
Pro
>WENV180815565
ODJP01000759
202720
Fusobacteriota
TGG
Pro
>WENV180816234
ODJP01006559
192090
Fusobacteriota
CAT
Met
>WENV180816227
ODJP01006559
288880
Fusobacteriota
CTT
Lys
>WENV180815295
ODJP01000172
47168
Fusobacteriota
GCT
Ser
>WENV180816351
ODJP01010457
404073
Fusobacteriota
TTG
Gln
>WENV180816185
ODJP01005723
404073
Fusobacteriota
TTG
Gln
>WENV180815615
ODJP01000898
404073
Fusobacteriota
TTG
Gln
>WENV180815940
ODJP01002816
403662
Fusobacteriota
TTC
Glu
>WENV180816485
ODJP01017543
228619
Fusobacteriota
TCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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