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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180821973
ODJS01183410
183770
Fusobacteriota
GAT
Ile
>WENV180821982
ODJS01186938
187804
Fusobacteriota
GTC
Asp
>WENV180821138
ODJS01000898
141145
Fusobacteriota
>WENV180821981
ODJS01186938
288879
Fusobacteriota
TAC
Val
>WENV180821222
ODJS01002218
119283
Fusobacteriota
GTA
Tyr
>WENV180821676
ODJS01034233
280538
Fusobacteriota
TTT
Lys
>WENV180821134
ODJS01000898
280538
Fusobacteriota
TTT
Lys
>WENV180821375
ODJS01006934
184485
Fusobacteriota
GTC
Asp
>WENV180821301
ODJS01003587
183767
Fusobacteriota
TGC
Ala
>WENV180821136
ODJS01000898
156979
Fusobacteriota
CAT
Met
>WENV180821131
ODJS01000898
57899
Fusobacteriota
TAA
Leu
>WENV180821677
ODJS01034233
143640
Fusobacteriota
TAG
Leu
>WENV180821300
ODJS01003587
143640
Fusobacteriota
TAG
Leu
>WENV180821675
ODJS01034233
358658
Fusobacteriota
GTG
His
>WENV180821679
ODJS01034457
187240
Fusobacteriota
TCG
Arg
>WENV180821987
ODJS01187632
288877
Fusobacteriota
GTT
Asn
>WENV180821221
ODJS01002218
407549
Fusobacteriota
TTC
Glu
>WENV180821137
ODJS01000898
407549
Fusobacteriota
TTC
Glu
>WENV180821299
ODJS01003587
288878
Fusobacteriota
TGT
Thr
>WENV180821220
ODJS01002218
288878
Fusobacteriota
TGT
Thr
>WENV180821132
ODJS01000898
214188
Fusobacteriota
CAT
Met
>WENV180821135
ODJS01000898
183769
Fusobacteriota
TCT
Arg
>WENV180821745
ODJS01047296
484173
Fusobacteriota
GCA
Cys
>WENV180821208
ODJS01001894
183773
Fusobacteriota
CCT
Arg
>WENV180821105
ODJS01000759
74687
Fusobacteriota
CAA
Leu
>WENV180821104
ODJS01000759
183772
Fusobacteriota
ACG
Arg
>WENV180821870
ODJS01092543
202720
Fusobacteriota
TGG
Pro
>WENV180821775
ODJS01056088
202720
Fusobacteriota
TGG
Pro
>WENV180821549
ODJS01018566
192090
Fusobacteriota
CAT
Met
>WENV180821302
ODJS01003587
192090
Fusobacteriota
CAT
Met
>WENV180821747
ODJS01047296
288880
Fusobacteriota
CTT
Lys
>WENV180821109
ODJS01000807
47168
Fusobacteriota
GCT
Ser
>WENV180821658
ODJS01031326
404073
Fusobacteriota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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