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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180822589
ODJT01012330
211453
Bacteroidota
TCT
Arg
>WENV180822206
ODJT01000078
192166
Bacteroidota
GTT
Asn
>WENV180822223
ODJT01000098
402390
Bacteroidota
TTC
Glu
>WENV180822402
ODJT01000636
402390
Bacteroidota
TTC
Glu
>WENV180822654
ODJT01046103
402390
Bacteroidota
TTC
Glu
>WENV180822115
ODJT01000019
406285
Bacteroidota
GGT
Thr
>WENV180822271
ODJT01000179
222068
Bacteroidota
GAT
Ile
>WENV180822562
ODJT01004828
179464
Bacteroidota
CAT
Met
>WENV180822653
ODJT01046055
348707
Bacteroidota
TTT
Lys
>WENV180822353
ODJT01000424
292594
Bacteroidota
GGG
Pro
>WENV180822493
ODJT01001497
281190
Bacteroidota
CAT
Met
>WENV180822351
ODJT01000424
157400
Bacteroidota
TAC
Val
>WENV180822350
ODJT01000424
157400
Bacteroidota
TAC
Val
>WENV180822321
ODJT01000325
157400
Bacteroidota
TAC
Val
>WENV180822241
ODJT01000116
157400
Bacteroidota
TAC
Val
>WENV180822112
ODJT01000019
483528
Bacteroidota
GCA
Cys
>WENV180822117
ODJT01000019
320669
Bacteroidota
GAA
Phe
>WENV180822248
ODJT01000127
130793
Bacteroidota
TAG
Leu
>WENV180822407
ODJT01000674
293174
Bacteroidota
CCC
Gly
>WENV180822559
ODJT01004471
400850
Bacteroidota
TTC
Glu
>WENV180822623
ODJT01031388
317815
Bacteroidota
TCC
Gly
>WENV180822207
ODJT01000078
187105
Bacteroidota
CAT
Met
>WENV180822192
ODJT01000060
187358
Bacteroidota
GTG
His
>WENV180822183
ODJT01000055
187358
Bacteroidota
GTG
His
>WENV180822184
ODJT01000055
483469
Bacteroidota
TTG
Gln
>WENV180822405
ODJT01000674
483469
Bacteroidota
TTG
Gln
>WENV180822446
ODJT01001111
187628
Bacteroidota
TCT
Arg
>WENV180822643
ODJT01044238
404109
Bacteroidota
CTC
Glu
>WENV180822209
ODJT01000081
47445
Bacteroidota
TAA
Leu
>WENV180822331
ODJT01000341
47445
Bacteroidota
TAA
Leu
>WENV180822329
ODJT01000334
147999
Bacteroidota
CAA
Leu
>WENV180822309
ODJT01000279
147999
Bacteroidota
CAA
Leu
>WENV180822185
ODJT01000057
176809
Bacteroidota
TGT
Thr
>WENV180822272
ODJT01000179
179822
Bacteroidota
TGC
Ala
>WENV180822182
ODJT01000053
179471
Bacteroidota
CAT
Met
>WENV180822145
ODJT01000034
87360
Bacteroidota
GCT
Ser
>WENV180822598
ODJT01017708
481284
Bacteroidota
CCA
Trp
>WENV180822193
ODJT01000061
284409
Bacteroidota
CAT
Met
>WENV180822297
ODJT01000242
207889
Bacteroidota
CAT
Met
>WENV180822578
ODJT01009418
284313
Bacteroidota
TTT
Lys
>WENV180822585
ODJT01011197
119316
Bacteroidota
TAG
Leu
>WENV180822273
ODJT01000180
187426
Bacteroidota
GGC
Ala
>WENV180822116
ODJT01000019
498978
Bacteroidota
CCA
Trp
>WENV180822205
ODJT01000077
406393
Bacteroidota
CCT
Arg
>WENV180822454
ODJT01001184
21173
Bacteroidota
GGA
Ser
>WENV180822237
ODJT01000109
75391
Bacteroidota
GAG
Leu
>WENV180822458
ODJT01001204
293216
Bacteroidota
CTT
Lys
>WENV180822111
ODJT01000018
406019
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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