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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180857058
ODLA01001665
295385
Bacteroidota
CCA
Trp
>WENV180857336
ODLA01058781
57660
Bacteroidota
TGA
Ser
>WENV180857359
ODLA01074024
398829
Bacteroidota
CCT
Arg
>WENV180856965
ODLA01000088
482909
Bacteroidota
TTG
Gln
>WENV180857272
ODLA01026219
222068
Bacteroidota
GAT
Ile
>WENV180857195
ODLA01011015
179464
Bacteroidota
CAT
Met
>WENV180857208
ODLA01013924
157895
Bacteroidota
TAC
Val
>WENV180857350
ODLA01068685
404663
Bacteroidota
GGT
Thr
>WENV180857277
ODLA01027380
400850
Bacteroidota
TTC
Glu
>WENV180857105
ODLA01003158
317815
Bacteroidota
TCC
Gly
>WENV180857273
ODLA01026219
179822
Bacteroidota
TGC
Ala
>WENV180857238
ODLA01017805
179471
Bacteroidota
CAT
Met
>WENV180857041
ODLA01001197
280478
Bacteroidota
GCC
Gly
>WENV180856938
ODLA01000019
280478
Bacteroidota
GCC
Gly
>WENV180857152
ODLA01006241
187400
Bacteroidota
GTT
Asn
>WENV180856999
ODLA01000407
228511
Bacteroidota
GAT
Ile
>WENV180856942
ODLA01000026
372845
Bacteroidota
CCA
Trp
>WENV180856985
ODLA01000190
331443
Bacteroidota
CGT
Thr
>WENV180857240
ODLA01017961
284313
Bacteroidota
TTT
Lys
>WENV180857189
ODLA01010054
185161
Bacteroidota
GTT
Asn
>WENV180857107
ODLA01003212
416636
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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