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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180865356
ODLI01137650
118433
Bacteroidota
TAG
Leu
>WENV180865173
ODLI01039391
400161
Bacteroidota
GGT
Thr
>WENV180864795
ODLI01000017
179467
Bacteroidota
TGT
Thr
>WENV180864838
ODLI01000117
211453
Bacteroidota
TCT
Arg
>WENV180864916
ODLI01001215
282852
Bacteroidota
TTT
Lys
>WENV180865338
ODLI01126424
402390
Bacteroidota
TTC
Glu
>WENV180865063
ODLI01012644
481329
Bacteroidota
>WENV180865239
ODLI01064093
482909
Bacteroidota
TTG
Gln
>WENV180865232
ODLI01061203
400949
Bacteroidota
CCT
Arg
>WENV180864966
ODLI01002898
481267
Bacteroidota
CTG
Gln
>WENV180864825
ODLI01000066
179464
Bacteroidota
CAT
Met
>WENV180864994
ODLI01005112
178571
Bacteroidota
GTT
Asn
>WENV180865022
ODLI01009270
178572
Bacteroidota
CAT
Met
>WENV180865105
ODLI01020438
56385
Bacteroidota
TGA
Ser
>WENV180865021
ODLI01009173
431429
Bacteroidota
CCT
Arg
>WENV180865037
ODLI01010690
404663
Bacteroidota
GGT
Thr
>WENV180864782
ODLI01000004
400850
Bacteroidota
TTC
Glu
>WENV180864841
ODLI01000127
292874
Bacteroidota
GAA
Phe
>WENV180864840
ODLI01000127
292874
Bacteroidota
GAA
Phe
>WENV180864823
ODLI01000066
30778
Bacteroidota
GGA
Ser
>WENV180864799
ODLI01000017
481345
Bacteroidota
CCA
Trp
>WENV180865165
ODLI01035764
175886
Bacteroidota
GGC
Ala
>WENV180864967
ODLI01002925
283315
Bacteroidota
CGT
Thr
>WENV180864923
ODLI01001701
400815
Bacteroidota
TTC
Glu
>WENV180865334
ODLI01122605
74062
Bacteroidota
GAG
Leu
>WENV180865211
ODLI01054132
20533
Bacteroidota
GGA
Ser
>WENV180864855
ODLI01000212
179468
Bacteroidota
GTC
Asp
>WENV180864907
ODLI01000770
179468
Bacteroidota
GTC
Asp
>WENV180865079
ODLI01015776
179468
Bacteroidota
GTC
Asp
>WENV180864796
ODLI01000017
140945
Bacteroidota
GTA
Tyr
>WENV180865255
ODLI01071607
404109
Bacteroidota
CTC
Glu
>WENV180865013
ODLI01007440
404109
Bacteroidota
CTC
Glu
>WENV180865137
ODLI01027374
156383
Bacteroidota
GGG
Pro
>WENV180865009
ODLI01007309
46648
Bacteroidota
TAA
Leu
>WENV180864797
ODLI01000017
293273
Bacteroidota
TCC
Gly
>WENV180864822
ODLI01000064
179471
Bacteroidota
CAT
Met
>WENV180865121
ODLI01024119
280478
Bacteroidota
GCC
Gly
>WENV180865174
ODLI01039906
284236
Bacteroidota
CGG
Pro
>WENV180864798
ODLI01000017
403758
Bacteroidota
GGT
Thr
>WENV180864932
ODLI01002059
187814
Bacteroidota
GTC
Asp
>WENV180865023
ODLI01009388
178134
Bacteroidota
TGG
Pro
>WENV180865102
ODLI01019311
118220
Bacteroidota
GTA
Tyr
>WENV180864783
ODLI01000005
179821
Bacteroidota
GTG
His
>WENV180864993
ODLI01005089
481044
Bacteroidota
>WENV180865170
ODLI01038573
481328
Bacteroidota
TTG
Gln
>WENV180865217
ODLI01054782
285750
Bacteroidota
CCC
Gly
>WENV180865040
ODLI01010863
284456
Bacteroidota
CGG
Pro
>WENV180865026
ODLI01009388
73509
Bacteroidota
GAG
Leu
>WENV180864794
ODLI01000016
284520
Bacteroidota
TTT
Lys
>WENV180864805
ODLI01000029
157442
Bacteroidota
TAC
Val
>WENV180864804
ODLI01000029
156405
Bacteroidota
TAC
Val
>WENV180865149
ODLI01031821
416636
Bacteroidota
TTC
Glu
>WENV180865091
ODLI01018576
481045
Bacteroidota
CCC
Gly
>WENV180864968
ODLI01002925
481045
Bacteroidota
CCC
Gly
>WENV180864779
ODLI01000002
118400
Bacteroidota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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