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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180887109
ODMF01000102
46687
Bacillota
TAA
Leu
>WENV180887164
ODMF01004147
73009
Bacillota
CAG
Leu
>WENV180887077
ODMF01000018
480524
Bacillota
GCA
Cys
>WENV180887093
ODMF01000043
195463
Bacillota
GTC
Asp
>WENV180887115
ODMF01000102
195463
Bacillota
GTC
Asp
>WENV180887122
ODMF01000102
195463
Bacillota
GTC
Asp
>WENV180887161
ODMF01003850
401837
Bacillota
TTC
Glu
>WENV180887094
ODMF01000043
354793
Bacillota
GTG
His
>WENV180887126
ODMF01000102
354793
Bacillota
GTG
His
>WENV180887070
ODMF01000016
199988
Bacillota
ACG
Arg
>WENV180887151
ODMF01001005
322848
Bacillota
CTT
Lys
>WENV180887075
ODMF01000018
480918
Bacillota
>WENV180887162
ODMF01003850
5763
Bacillota
TGA
Ser
>WENV180887163
ODMF01004071
281326
Bacillota
TGC
Ala
>WENV180887116
ODMF01000102
283719
Bacillota
GAA
Phe
>WENV180887123
ODMF01000102
283719
Bacillota
GAA
Phe
>WENV180887065
ODMF01000008
183952
Bacillota
CGG
Pro
>WENV180887160
ODMF01003243
329074
Bacillota
TGC
Ala
>WENV180887133
ODMF01000125
73132
Bacillota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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