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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180887491
ODMI01005314
283303
Bacillota
GTC
Asp
>WENV180887636
ODMI01036639
184537
Bacillota
ACG
Arg
>WENV180887442
ODMI01002385
296855
Bacillota
GGT
Thr
>WENV180887548
ODMI01011212
48505
Bacillota
TGA
Ser
>WENV180887570
ODMI01017034
289717
Bacillota
CTT
Lys
>WENV180887639
ODMI01041360
20932
Bacillota
GCT
Ser
>WENV180887520
ODMI01007613
291553
Bacillota
GAA
Phe
>WENV180887593
ODMI01024833
283622
Bacillota
CTT
Lys
>WENV180887518
ODMI01007259
339995
Bacillota
TGC
Ala
>WENV180887615
ODMI01031948
20942
Bacillota
GGA
Ser
>WENV180887443
ODMI01002385
184495
Bacillota
CAT
Met
>WENV180887607
ODMI01028781
141202
Bacillota
CAA
Leu
>WENV180887558
ODMI01011712
178627
Bacillota
TCT
Arg
>WENV180887604
ODMI01026715
404091
Bacillota
TTG
Gln
>WENV180887603
ODMI01026715
289716
Bacillota
GTG
His
>WENV180887573
ODMI01017353
432453
Bacillota
TTC
Glu
>WENV180887555
ODMI01011552
480337
Bacillota
TCC
Gly
>WENV180887576
ODMI01017353
333281
Bacillota
GTT
Asn
>WENV180887519
ODMI01007613
280547
Bacillota
GTC
Asp
>WENV180887608
ODMI01028786
289761
Bacillota
TTT
Lys
>WENV180887574
ODMI01017353
289715
Bacillota
TAC
Val
>WENV180887531
ODMI01008257
20943
Bacillota
CGA
Ser
>WENV180887494
ODMI01005314
141141
Bacillota
GTA
Tyr
>WENV180887554
ODMI01011552
208539
Bacillota
TGG
Pro
>WENV180887556
ODMI01011552
184539
Bacillota
TCT
Arg
>WENV180887542
ODMI01009328
178610
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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