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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180958386
ODUL01003745
288834
Bacillota
TAC
Val
>WENV180958761
ODUL01035398
283303
Bacillota
GTC
Asp
>WENV180958392
ODUL01003745
212982
Bacillota
ACG
Arg
>WENV180958437
ODUL01004761
184537
Bacillota
ACG
Arg
>WENV180958769
ODUL01038560
408526
Bacillota
GCA
Cys
>WENV180958731
ODUL01028444
296855
Bacillota
GGT
Thr
>WENV180958535
ODUL01007813
48505
Bacillota
TGA
Ser
>WENV180958567
ODUL01009879
289717
Bacillota
CTT
Lys
>WENV180958755
ODUL01035343
291553
Bacillota
GAA
Phe
>WENV180958611
ODUL01013362
283622
Bacillota
CTT
Lys
>WENV180958726
ODUL01027288
339995
Bacillota
TGC
Ala
>WENV180958274
ODUL01001968
20942
Bacillota
GGA
Ser
>WENV180958732
ODUL01028444
184495
Bacillota
CAT
Met
>WENV180958381
ODUL01003576
141202
Bacillota
CAA
Leu
>WENV180958449
ODUL01005161
400041
Bacillota
CCG
Arg
>WENV180958124
ODUL01000496
178152
Bacillota
GTT
Asn
>WENV180958179
ODUL01000868
178152
Bacillota
GTT
Asn
>WENV180958534
ODUL01007712
178152
Bacillota
GTT
Asn
>WENV180958922
ODUL01128429
178152
Bacillota
GTT
Asn
>WENV180958281
ODUL01002014
178627
Bacillota
TCT
Arg
>WENV180958671
ODUL01019942
289713
Bacillota
TGT
Thr
>WENV180958354
ODUL01003267
289713
Bacillota
TGT
Thr
>WENV180958491
ODUL01006407
404091
Bacillota
TTG
Gln
>WENV180958490
ODUL01006407
289716
Bacillota
GTG
His
>WENV180958390
ODUL01003745
455891
Bacillota
GCC
Gly
>WENV180958330
ODUL01002997
432453
Bacillota
TTC
Glu
>WENV180958649
ODUL01017921
480337
Bacillota
TCC
Gly
>WENV180958424
ODUL01004318
301649
Bacillota
TTT
Lys
>WENV180958388
ODUL01003745
301649
Bacillota
TTT
Lys
>WENV180958536
ODUL01007841
91824
Bacillota
CAA
Leu
>WENV180958329
ODUL01002997
333281
Bacillota
GTT
Asn
>WENV180958754
ODUL01035343
280547
Bacillota
GTC
Asp
>WENV180958768
ODUL01038560
445407
Bacillota
GCC
Gly
>WENV180958492
ODUL01006407
289761
Bacillota
TTT
Lys
>WENV180958331
ODUL01002997
289715
Bacillota
TAC
Val
>WENV180958930
ODUL01133461
141141
Bacillota
GTA
Tyr
>WENV180958924
ODUL01129676
141141
Bacillota
GTA
Tyr
>WENV180958514
ODUL01007012
141141
Bacillota
GTA
Tyr
>WENV180958648
ODUL01017921
208539
Bacillota
TGG
Pro
>WENV180958650
ODUL01017921
184539
Bacillota
TCT
Arg
>WENV180958765
ODUL01037751
178610
Bacillota
GTT
Asn
>WENV180958665
ODUL01018747
178610
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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