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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181013304
ODWN01000260
184065
Actinomycetota
TGG
Pro
>WENV181013513
ODWN01001065
184065
Actinomycetota
TGG
Pro
>WENV181014168
ODWN01017601
184065
Actinomycetota
TGG
Pro
>WENV181013229
ODWN01000116
194706
Actinomycetota
CAT
Met
>WENV181014334
ODWN01032612
284890
Actinomycetota
CTT
Lys
>WENV181014531
ODWN01066088
284890
Actinomycetota
CTT
Lys
>WENV181013953
ODWN01006902
284889
Actinomycetota
CTC
Glu
>WENV181014095
ODWN01012927
284889
Actinomycetota
CTC
Glu
>WENV181014224
ODWN01021109
284889
Actinomycetota
CTC
Glu
>WENV181013131
ODWN01000017
184493
Actinomycetota
GGG
Pro
>WENV181013643
ODWN01002167
184493
Actinomycetota
GGG
Pro
>WENV181013662
ODWN01002327
443526
Actinomycetota
CAC
Val
>WENV181013291
ODWN01000231
285880
Actinomycetota
TCT
Arg
>WENV181013369
ODWN01000472
292656
Actinomycetota
ACG
Arg
>WENV181013638
ODWN01002139
47453
Actinomycetota
GAG
Leu
>WENV181013537
ODWN01001288
47453
Actinomycetota
GAG
Leu
>WENV181013471
ODWN01000892
281635
Actinomycetota
GGC
Ala
>WENV181014392
ODWN01040773
281635
Actinomycetota
GGC
Ala
>WENV181013644
ODWN01002169
281635
Actinomycetota
GGC
Ala
>WENV181013778
ODWN01003717
285876
Actinomycetota
CGT
Thr
>WENV181013454
ODWN01000788
180944
Actinomycetota
GTC
Asp
>WENV181014250
ODWN01023801
280744
Actinomycetota
GTG
His
>WENV181013826
ODWN01004399
287251
Actinomycetota
CTT
Lys
>WENV181013688
ODWN01002630
180071
Actinomycetota
CAT
Met
>WENV181013687
ODWN01002630
180071
Actinomycetota
CAT
Met
>WENV181013439
ODWN01000693
221845
Actinomycetota
GAT
Ile
>WENV181013303
ODWN01000260
481756
Actinomycetota
TCC
Gly
>WENV181013562
ODWN01001514
285877
Actinomycetota
CCG
Arg
>WENV181013686
ODWN01002630
124580
Actinomycetota
GTA
Tyr
>WENV181014245
ODWN01022743
187640
Actinomycetota
TGT
Thr
>WENV181014227
ODWN01021307
187640
Actinomycetota
TGT
Thr
>WENV181013179
ODWN01000070
180945
Actinomycetota
CAT
Met
>WENV181014539
ODWN01067586
284887
Actinomycetota
GCC
Gly
>WENV181014380
ODWN01038575
284887
Actinomycetota
GCC
Gly
>WENV181014225
ODWN01021178
284887
Actinomycetota
GCC
Gly
>WENV181013333
ODWN01000373
292678
Actinomycetota
CTT
Lys
>WENV181013332
ODWN01000373
292678
Actinomycetota
CTT
Lys
>WENV181014086
ODWN01012467
297606
Actinomycetota
CCT
Arg
>WENV181013870
ODWN01004732
482493
Actinomycetota
CCC
Gly
>WENV181013224
ODWN01000111
482493
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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