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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
108 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181016171
ODWR01000297
118433
Bacteroidota
TAG
Leu
>WENV181016185
ODWR01000355
118433
Bacteroidota
TAG
Leu
>WENV181016831
ODWR01008671
118433
Bacteroidota
TAG
Leu
>WENV181017061
ODWR01022122
118433
Bacteroidota
TAG
Leu
>WENV181015869
ODWR01000004
400161
Bacteroidota
GGT
Thr
>WENV181016370
ODWR01000850
400161
Bacteroidota
GGT
Thr
>WENV181017259
ODWR01042653
211453
Bacteroidota
TCT
Arg
>WENV181016042
ODWR01000129
282852
Bacteroidota
TTT
Lys
>WENV181016134
ODWR01000254
282852
Bacteroidota
TTT
Lys
>WENV181016186
ODWR01000357
282852
Bacteroidota
TTT
Lys
>WENV181016367
ODWR01000846
282852
Bacteroidota
TTT
Lys
>WENV181015888
ODWR01000008
481329
Bacteroidota
>WENV181017407
ODWR01070168
400949
Bacteroidota
CCT
Arg
>WENV181016446
ODWR01001100
400949
Bacteroidota
CCT
Arg
>WENV181016216
ODWR01000443
400949
Bacteroidota
CCT
Arg
>WENV181016187
ODWR01000359
400949
Bacteroidota
CCT
Arg
>WENV181016802
ODWR01007846
118221
Bacteroidota
CAA
Leu
>WENV181017497
ODWR01103784
222068
Bacteroidota
GAT
Ile
>WENV181016590
ODWR01002686
481267
Bacteroidota
CTG
Gln
>WENV181017367
ODWR01061065
179464
Bacteroidota
CAT
Met
>WENV181016470
ODWR01001288
178571
Bacteroidota
GTT
Asn
>WENV181016028
ODWR01000104
178571
Bacteroidota
GTT
Asn
>WENV181016000
ODWR01000072
178571
Bacteroidota
GTT
Asn
>WENV181015918
ODWR01000019
178571
Bacteroidota
GTT
Asn
>WENV181017207
ODWR01036165
281190
Bacteroidota
CAT
Met
>WENV181017642
ODWR01204393
157895
Bacteroidota
TAC
Val
>WENV181016309
ODWR01000662
157895
Bacteroidota
TAC
Val
>WENV181016173
ODWR01000304
178572
Bacteroidota
CAT
Met
>WENV181016027
ODWR01000103
178572
Bacteroidota
CAT
Met
>WENV181017531
ODWR01123701
157400
Bacteroidota
TAC
Val
>WENV181017647
ODWR01205288
172085
Bacteroidota
TAC
Val
>WENV181017072
ODWR01023466
172085
Bacteroidota
TAC
Val
>WENV181016647
ODWR01003699
172085
Bacteroidota
TAC
Val
>WENV181016541
ODWR01002178
172085
Bacteroidota
TAC
Val
>WENV181016325
ODWR01000703
172085
Bacteroidota
TAC
Val
>WENV181016043
ODWR01000137
172085
Bacteroidota
TAC
Val
>WENV181015911
ODWR01000015
172085
Bacteroidota
TAC
Val
>WENV181015886
ODWR01000008
172085
Bacteroidota
TAC
Val
>WENV181015856
ODWR01000001
172085
Bacteroidota
TAC
Val
>WENV181016103
ODWR01000213
56385
Bacteroidota
TGA
Ser
>WENV181016182
ODWR01000342
431429
Bacteroidota
CCT
Arg
>WENV181015983
ODWR01000064
30327
Bacteroidota
GCT
Ser
>WENV181016386
ODWR01000937
312035
Bacteroidota
CCA
Trp
>WENV181016371
ODWR01000850
312035
Bacteroidota
CCA
Trp
>WENV181016984
ODWR01016531
242241
Bacteroidota
GTC
Asp
>WENV181016630
ODWR01003472
242241
Bacteroidota
GTC
Asp
>WENV181016029
ODWR01000105
242241
Bacteroidota
GTC
Asp
>WENV181016198
ODWR01000397
404663
Bacteroidota
GGT
Thr
>WENV181016952
ODWR01015439
292874
Bacteroidota
GAA
Phe
>WENV181016184
ODWR01000353
175944
Bacteroidota
CAT
Met
>WENV181016346
ODWR01000726
175886
Bacteroidota
GGC
Ala
>WENV181017449
ODWR01079933
70604
Bacteroidota
TGA
Ser
>WENV181016318
ODWR01000694
283315
Bacteroidota
CGT
Thr
>WENV181016224
ODWR01000471
283315
Bacteroidota
CGT
Thr
>WENV181015884
ODWR01000008
283315
Bacteroidota
CGT
Thr
>WENV181015917
ODWR01000019
400815
Bacteroidota
TTC
Glu
>WENV181015961
ODWR01000042
20533
Bacteroidota
GGA
Ser
>WENV181015858
ODWR01000002
20533
Bacteroidota
GGA
Ser
>WENV181017645
ODWR01205070
404109
Bacteroidota
CTC
Glu
>WENV181016534
ODWR01002126
404109
Bacteroidota
CTC
Glu
>WENV181016445
ODWR01001095
156383
Bacteroidota
GGG
Pro
>WENV181016034
ODWR01000116
156383
Bacteroidota
GGG
Pro
>WENV181016023
ODWR01000095
156383
Bacteroidota
GGG
Pro
>WENV181017502
ODWR01106631
176809
Bacteroidota
TGT
Thr
>WENV181016672
ODWR01004141
115044
Bacteroidota
GTA
Tyr
>WENV181017512
ODWR01112538
179822
Bacteroidota
TGC
Ala
>WENV181016350
ODWR01000769
46648
Bacteroidota
TAA
Leu
>WENV181016215
ODWR01000443
46648
Bacteroidota
TAA
Leu
>WENV181016376
ODWR01000882
46648
Bacteroidota
TAA
Leu
>WENV181016400
ODWR01000997
46648
Bacteroidota
TAA
Leu
>WENV181015891
ODWR01000008
118432
Bacteroidota
CAG
Leu
>WENV181016663
ODWR01003934
280478
Bacteroidota
GCC
Gly
>WENV181016163
ODWR01000280
284236
Bacteroidota
CGG
Pro
>WENV181017093
ODWR01025768
481284
Bacteroidota
CCA
Trp
>WENV181017640
ODWR01204282
187400
Bacteroidota
GTT
Asn
>WENV181016422
ODWR01001020
284457
Bacteroidota
CAT
Met
>WENV181016285
ODWR01000613
284457
Bacteroidota
CAT
Met
>WENV181015971
ODWR01000057
284457
Bacteroidota
CAT
Met
>WENV181015966
ODWR01000049
284457
Bacteroidota
CAT
Met
>WENV181015997
ODWR01000070
187814
Bacteroidota
GTC
Asp
>WENV181016199
ODWR01000397
372845
Bacteroidota
CCA
Trp
>WENV181016379
ODWR01000899
178134
Bacteroidota
TGG
Pro
>WENV181016127
ODWR01000245
178134
Bacteroidota
TGG
Pro
>WENV181016493
ODWR01001428
331443
Bacteroidota
CGT
Thr
>WENV181016648
ODWR01003699
118220
Bacteroidota
GTA
Tyr
>WENV181016369
ODWR01000850
118220
Bacteroidota
GTA
Tyr
>WENV181016218
ODWR01000450
118220
Bacteroidota
GTA
Tyr
>WENV181015887
ODWR01000008
118220
Bacteroidota
GTA
Tyr
>WENV181017392
ODWR01065933
284313
Bacteroidota
TTT
Lys
>WENV181017646
ODWR01205079
460845
Bacteroidota
CTC
Glu
>WENV181015933
ODWR01000028
481044
Bacteroidota
>WENV181016578
ODWR01002487
179653
Bacteroidota
GTG
His
>WENV181015962
ODWR01000043
179653
Bacteroidota
GTG
His
>WENV181016786
ODWR01007206
481328
Bacteroidota
TTG
Gln
>WENV181016575
ODWR01002390
481328
Bacteroidota
TTG
Gln
>WENV181016383
ODWR01000917
481328
Bacteroidota
TTG
Gln
>WENV181016117
ODWR01000230
481328
Bacteroidota
TTG
Gln
>WENV181017383
ODWR01063917
361792
Bacteroidota
GAA
Phe
>WENV181016682
ODWR01004343
285750
Bacteroidota
CCC
Gly
>WENV181017008
ODWR01018452
373714
Bacteroidota
GCC
Gly
>WENV181016511
ODWR01001624
284456
Bacteroidota
CGG
Pro
>WENV181016160
ODWR01000274
284456
Bacteroidota
CGG
Pro
>WENV181016122
ODWR01000237
284456
Bacteroidota
CGG
Pro
>WENV181015996
ODWR01000069
284456
Bacteroidota
CGG
Pro
>WENV181016129
ODWR01000245
73509
Bacteroidota
GAG
Leu
>WENV181015892
ODWR01000008
73509
Bacteroidota
GAG
Leu
>WENV181015885
ODWR01000008
481045
Bacteroidota
CCC
Gly
>WENV181016225
ODWR01000471
481045
Bacteroidota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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