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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181030154
ODXF01051776
288834
Bacillota
TAC
Val
>WENV181030256
ODXF01107184
212982
Bacillota
ACG
Arg
>WENV181029635
ODXF01001334
184537
Bacillota
ACG
Arg
>WENV181029305
ODXF01000067
408526
Bacillota
GCA
Cys
>WENV181029715
ODXF01002289
296855
Bacillota
GGT
Thr
>WENV181029743
ODXF01002884
48505
Bacillota
TGA
Ser
>WENV181030214
ODXF01082725
284746
Bacillota
CTG
Gln
>WENV181029683
ODXF01001907
289717
Bacillota
CTT
Lys
>WENV181029496
ODXF01000451
20932
Bacillota
GCT
Ser
>WENV181029303
ODXF01000067
291553
Bacillota
GAA
Phe
>WENV181029579
ODXF01000825
482593
Bacillota
CCC
Gly
>WENV181030304
ODXF01146563
339995
Bacillota
TGC
Ala
>WENV181029507
ODXF01000512
20942
Bacillota
GGA
Ser
>WENV181030267
ODXF01113524
287643
Bacillota
TAC
Val
>WENV181030246
ODXF01099222
338033
Bacillota
GAA
Phe
>WENV181029716
ODXF01002289
184495
Bacillota
CAT
Met
>WENV181029536
ODXF01000604
141202
Bacillota
CAA
Leu
>WENV181030051
ODXF01023238
400041
Bacillota
CCG
Arg
>WENV181029946
ODXF01012304
178152
Bacillota
GTT
Asn
>WENV181029587
ODXF01000897
178152
Bacillota
GTT
Asn
>WENV181029549
ODXF01000645
178152
Bacillota
GTT
Asn
>WENV181029379
ODXF01000210
178152
Bacillota
GTT
Asn
>WENV181030254
ODXF01104922
156730
Bacillota
ACG
Arg
>WENV181029377
ODXF01000210
178627
Bacillota
TCT
Arg
>WENV181029712
ODXF01002289
289713
Bacillota
TGT
Thr
>WENV181029632
ODXF01001334
404091
Bacillota
TTG
Gln
>WENV181029631
ODXF01001334
289716
Bacillota
GTG
His
>WENV181030266
ODXF01113524
287380
Bacillota
CTT
Lys
>WENV181029747
ODXF01003021
432453
Bacillota
TTC
Glu
>WENV181029595
ODXF01000924
480337
Bacillota
TCC
Gly
>WENV181030156
ODXF01051776
301649
Bacillota
TTT
Lys
>WENV181029383
ODXF01000223
119459
Bacillota
TAG
Leu
>WENV181030230
ODXF01090990
333281
Bacillota
GTT
Asn
>WENV181029746
ODXF01003021
333281
Bacillota
GTT
Asn
>WENV181029302
ODXF01000067
280547
Bacillota
GTC
Asp
>WENV181029633
ODXF01001334
289761
Bacillota
TTT
Lys
>WENV181029748
ODXF01003021
289715
Bacillota
TAC
Val
>WENV181029537
ODXF01000625
20943
Bacillota
CGA
Ser
>WENV181029594
ODXF01000924
208539
Bacillota
TGG
Pro
>WENV181029596
ODXF01000924
184539
Bacillota
TCT
Arg
>WENV181030270
ODXF01115443
178610
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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