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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181042501
ODXU01000365
57660
Bacteroidota
TGA
Ser
>WENV181042865
ODXU01012339
400161
Bacteroidota
GGT
Thr
>WENV181042817
ODXU01009363
179467
Bacteroidota
TGT
Thr
>WENV181042999
ODXU01025351
211453
Bacteroidota
TCT
Arg
>WENV181042477
ODXU01000247
192166
Bacteroidota
GTT
Asn
>WENV181043391
ODXU01172367
402390
Bacteroidota
TTC
Glu
>WENV181042853
ODXU01011141
402390
Bacteroidota
TTC
Glu
>WENV181042446
ODXU01000096
402390
Bacteroidota
TTC
Glu
>WENV181042445
ODXU01000096
402390
Bacteroidota
TTC
Glu
>WENV181043341
ODXU01135342
406285
Bacteroidota
GGT
Thr
>WENV181043031
ODXU01030515
201819
Bacteroidota
CAT
Met
>WENV181043125
ODXU01047993
118221
Bacteroidota
CAA
Leu
>WENV181042710
ODXU01004590
222068
Bacteroidota
GAT
Ile
>WENV181043381
ODXU01162067
120171
Bacteroidota
GTA
Tyr
>WENV181043067
ODXU01036565
179464
Bacteroidota
CAT
Met
>WENV181042545
ODXU01000600
287319
Bacteroidota
TTT
Lys
>WENV181042449
ODXU01000111
287319
Bacteroidota
TTT
Lys
>WENV181042448
ODXU01000111
287319
Bacteroidota
TTT
Lys
>WENV181042648
ODXU01002063
292594
Bacteroidota
GGG
Pro
>WENV181042994
ODXU01024656
281190
Bacteroidota
CAT
Met
>WENV181042569
ODXU01000847
157400
Bacteroidota
TAC
Val
>WENV181042568
ODXU01000847
157400
Bacteroidota
TAC
Val
>WENV181042475
ODXU01000241
157400
Bacteroidota
TAC
Val
>WENV181042474
ODXU01000241
157400
Bacteroidota
TAC
Val
>WENV181042606
ODXU01001529
483528
Bacteroidota
GCA
Cys
>WENV181042532
ODXU01000507
483528
Bacteroidota
GCA
Cys
>WENV181042496
ODXU01000297
320669
Bacteroidota
GAA
Phe
>WENV181042504
ODXU01000397
293174
Bacteroidota
CCC
Gly
>WENV181042656
ODXU01002475
20356
Bacteroidota
GGA
Ser
>WENV181043033
ODXU01030926
404663
Bacteroidota
GGT
Thr
>WENV181043153
ODXU01054444
400850
Bacteroidota
TTC
Glu
>WENV181042819
ODXU01009363
317815
Bacteroidota
TCC
Gly
>WENV181043387
ODXU01164917
292874
Bacteroidota
GAA
Phe
>WENV181042546
ODXU01000617
187105
Bacteroidota
CAT
Met
>WENV181042846
ODXU01010572
187358
Bacteroidota
GTG
His
>WENV181042651
ODXU01002158
187358
Bacteroidota
GTG
His
>WENV181042459
ODXU01000146
187358
Bacteroidota
GTG
His
>WENV181042870
ODXU01012867
483469
Bacteroidota
TTG
Gln
>WENV181042502
ODXU01000397
483469
Bacteroidota
TTG
Gln
>WENV181042492
ODXU01000282
187628
Bacteroidota
TCT
Arg
>WENV181042780
ODXU01007312
47445
Bacteroidota
TAA
Leu
>WENV181043366
ODXU01154434
156383
Bacteroidota
GGG
Pro
>WENV181042830
ODXU01010099
147999
Bacteroidota
CAA
Leu
>WENV181042634
ODXU01001769
147999
Bacteroidota
CAA
Leu
>WENV181042573
ODXU01000899
147999
Bacteroidota
CAA
Leu
>WENV181043380
ODXU01162067
176809
Bacteroidota
TGT
Thr
>WENV181042401
ODXU01000024
176809
Bacteroidota
TGT
Thr
>WENV181042461
ODXU01000182
176809
Bacteroidota
TGT
Thr
>WENV181042711
ODXU01004590
179822
Bacteroidota
TGC
Ala
>WENV181043250
ODXU01086671
189252
Bacteroidota
GGC
Ala
>WENV181042784
ODXU01007371
46648
Bacteroidota
TAA
Leu
>WENV181042862
ODXU01012214
56597
Bacteroidota
TGA
Ser
>WENV181042465
ODXU01000206
179471
Bacteroidota
CAT
Met
>WENV181042883
ODXU01013839
280478
Bacteroidota
GCC
Gly
>WENV181043022
ODXU01029424
87360
Bacteroidota
GCT
Ser
>WENV181042490
ODXU01000282
87360
Bacteroidota
GCT
Ser
>WENV181043181
ODXU01065585
481284
Bacteroidota
CCA
Trp
>WENV181042671
ODXU01002983
187400
Bacteroidota
GTT
Asn
>WENV181042670
ODXU01002983
187400
Bacteroidota
GTT
Asn
>WENV181042462
ODXU01000189
284409
Bacteroidota
CAT
Met
>WENV181042831
ODXU01010144
21008
Bacteroidota
GGA
Ser
>WENV181042895
ODXU01014738
230025
Bacteroidota
TGC
Ala
>WENV181042760
ODXU01006483
178134
Bacteroidota
TGG
Pro
>WENV181043140
ODXU01053057
331443
Bacteroidota
CGT
Thr
>WENV181042978
ODXU01022534
284313
Bacteroidota
TTT
Lys
>WENV181042953
ODXU01021183
119316
Bacteroidota
TAG
Leu
>WENV181042793
ODXU01008029
187426
Bacteroidota
GGC
Ala
>WENV181042604
ODXU01001484
187426
Bacteroidota
GGC
Ala
>WENV181042560
ODXU01000812
400088
Bacteroidota
GGT
Thr
>WENV181042765
ODXU01006946
498978
Bacteroidota
CCA
Trp
>WENV181042444
ODXU01000088
406393
Bacteroidota
CCT
Arg
>WENV181042867
ODXU01012455
285750
Bacteroidota
CCC
Gly
>WENV181043340
ODXU01134585
157442
Bacteroidota
TAC
Val
>WENV181042451
ODXU01000111
75391
Bacteroidota
GAG
Leu
>WENV181043252
ODXU01086727
416636
Bacteroidota
TTC
Glu
>WENV181042544
ODXU01000600
293216
Bacteroidota
CTT
Lys
>WENV181042408
ODXU01000027
406019
Bacteroidota
CCG
Arg
>WENV181043024
ODXU01029424
195454
Bacteroidota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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