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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181087623
OEAY01088888
183770
Fusobacteriota
GAT
Ile
>WENV181086557
OEAY01001254
187804
Fusobacteriota
GTC
Asp
>WENV181086564
OEAY01001254
187804
Fusobacteriota
GTC
Asp
>WENV181087188
OEAY01016643
187804
Fusobacteriota
GTC
Asp
>WENV181087185
OEAY01016643
141145
Fusobacteriota
>WENV181086556
OEAY01001254
288879
Fusobacteriota
TAC
Val
>WENV181086563
OEAY01001254
288879
Fusobacteriota
TAC
Val
>WENV181087187
OEAY01016643
288879
Fusobacteriota
TAC
Val
>WENV181087087
OEAY01010763
119283
Fusobacteriota
GTA
Tyr
>WENV181086940
OEAY01006171
289706
Fusobacteriota
GTG
His
>WENV181087181
OEAY01016643
280538
Fusobacteriota
TTT
Lys
>WENV181087363
OEAY01032617
280538
Fusobacteriota
TTT
Lys
>WENV181087008
OEAY01007741
184485
Fusobacteriota
GTC
Asp
>WENV181087281
OEAY01025016
184487
Fusobacteriota
TCT
Arg
>WENV181086632
OEAY01001706
184487
Fusobacteriota
TCT
Arg
>WENV181086568
OEAY01001254
183767
Fusobacteriota
TGC
Ala
>WENV181087624
OEAY01088888
183767
Fusobacteriota
TGC
Ala
>WENV181087183
OEAY01016643
156979
Fusobacteriota
CAT
Met
>WENV181087178
OEAY01016643
57899
Fusobacteriota
TAA
Leu
>WENV181086566
OEAY01001254
143640
Fusobacteriota
TAG
Leu
>WENV181087364
OEAY01032617
143640
Fusobacteriota
TAG
Leu
>WENV181087673
OEAY01118093
196958
Fusobacteriota
GAT
Ile
>WENV181087362
OEAY01032617
358658
Fusobacteriota
GTG
His
>WENV181086631
OEAY01001706
289707
Fusobacteriota
TTT
Lys
>WENV181087729
OEAY01143257
292614
Fusobacteriota
TGC
Ala
>WENV181087209
OEAY01017692
187240
Fusobacteriota
TCG
Arg
>WENV181087473
OEAY01048689
187240
Fusobacteriota
TCG
Arg
>WENV181087703
OEAY01132989
288877
Fusobacteriota
GTT
Asn
>WENV181086571
OEAY01001254
464812
Fusobacteriota
TTG
Gln
>WENV181087365
OEAY01032617
464812
Fusobacteriota
TTG
Gln
>WENV181086941
OEAY01006171
292724
Fusobacteriota
TTT
Lys
>WENV181086562
OEAY01001254
407549
Fusobacteriota
TTC
Glu
>WENV181087086
OEAY01010763
407549
Fusobacteriota
TTC
Glu
>WENV181087184
OEAY01016643
407549
Fusobacteriota
TTC
Glu
>WENV181086565
OEAY01001254
288878
Fusobacteriota
TGT
Thr
>WENV181087085
OEAY01010763
288878
Fusobacteriota
TGT
Thr
>WENV181087179
OEAY01016643
214188
Fusobacteriota
CAT
Met
>WENV181087554
OEAY01062817
289708
Fusobacteriota
TGT
Thr
>WENV181087182
OEAY01016643
183769
Fusobacteriota
TCT
Arg
>WENV181086559
OEAY01001254
484173
Fusobacteriota
GCA
Cys
>WENV181086879
OEAY01004908
74687
Fusobacteriota
CAA
Leu
>WENV181086878
OEAY01004908
183772
Fusobacteriota
ACG
Arg
>WENV181086570
OEAY01001254
202720
Fusobacteriota
TGG
Pro
>WENV181087360
OEAY01032617
202720
Fusobacteriota
TGG
Pro
>WENV181086569
OEAY01001254
192090
Fusobacteriota
CAT
Met
>WENV181086561
OEAY01001254
288880
Fusobacteriota
CTT
Lys
>WENV181087032
OEAY01008996
47168
Fusobacteriota
GCT
Ser
>WENV181086965
OEAY01006871
404073
Fusobacteriota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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