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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181161272
OEIK01281911
183770
Fusobacteriota
GAT
Ile
>WENV181160425
OEIK01008099
187804
Fusobacteriota
GTC
Asp
>WENV181160422
OEIK01008099
141145
Fusobacteriota
>WENV181161264
OEIK01279598
141145
Fusobacteriota
>WENV181160424
OEIK01008099
288879
Fusobacteriota
TAC
Val
>WENV181160348
OEIK01006201
119283
Fusobacteriota
GTA
Tyr
>WENV181160418
OEIK01008099
280538
Fusobacteriota
TTT
Lys
>WENV181160370
OEIK01006725
280538
Fusobacteriota
TTT
Lys
>WENV181160273
OEIK01004601
184485
Fusobacteriota
GTC
Asp
>WENV181159773
OEIK01000135
184485
Fusobacteriota
GTC
Asp
>WENV181159761
OEIK01000088
184485
Fusobacteriota
GTC
Asp
>WENV181160218
OEIK01003201
184487
Fusobacteriota
TCT
Arg
>WENV181160011
OEIK01001319
184487
Fusobacteriota
TCT
Arg
>WENV181161273
OEIK01281911
183767
Fusobacteriota
TGC
Ala
>WENV181160865
OEIK01048054
183767
Fusobacteriota
TGC
Ala
>WENV181160420
OEIK01008099
156979
Fusobacteriota
CAT
Met
>WENV181160953
OEIK01070665
57899
Fusobacteriota
TAA
Leu
>WENV181160863
OEIK01048054
143640
Fusobacteriota
TAG
Leu
>WENV181160371
OEIK01006725
143640
Fusobacteriota
TAG
Leu
>WENV181160541
OEIK01013306
196958
Fusobacteriota
GAT
Ile
>WENV181160369
OEIK01006725
358658
Fusobacteriota
GTG
His
>WENV181161192
OEIK01210686
289707
Fusobacteriota
TTT
Lys
>WENV181160217
OEIK01003201
289707
Fusobacteriota
TTT
Lys
>WENV181160542
OEIK01013306
292614
Fusobacteriota
TGC
Ala
>WENV181160920
OEIK01061846
187240
Fusobacteriota
TCG
Arg
>WENV181160636
OEIK01019235
288877
Fusobacteriota
GTT
Asn
>WENV181160776
OEIK01035865
288877
Fusobacteriota
GTT
Asn
>WENV181160777
OEIK01036269
288877
Fusobacteriota
GTT
Asn
>WENV181160829
OEIK01043137
288877
Fusobacteriota
GTT
Asn
>WENV181161309
OEIK01298684
464812
Fusobacteriota
TTG
Gln
>WENV181160372
OEIK01006725
464812
Fusobacteriota
TTG
Gln
>WENV181161078
OEIK01124560
292724
Fusobacteriota
TTT
Lys
>WENV181160010
OEIK01001319
292724
Fusobacteriota
TTT
Lys
>WENV181160421
OEIK01008099
407549
Fusobacteriota
TTC
Glu
>WENV181160347
OEIK01006201
407549
Fusobacteriota
TTC
Glu
>WENV181161303
OEIK01298392
407549
Fusobacteriota
TTC
Glu
>WENV181160862
OEIK01048054
288878
Fusobacteriota
TGT
Thr
>WENV181160346
OEIK01006201
288878
Fusobacteriota
TGT
Thr
>WENV181161203
OEIK01214712
214188
Fusobacteriota
CAT
Met
>WENV181159772
OEIK01000135
289739
Fusobacteriota
TAC
Val
>WENV181159826
OEIK01000245
289708
Fusobacteriota
TGT
Thr
>WENV181159774
OEIK01000135
289708
Fusobacteriota
TGT
Thr
>WENV181160419
OEIK01008099
183769
Fusobacteriota
TCT
Arg
>WENV181160707
OEIK01026564
183773
Fusobacteriota
CCT
Arg
>WENV181160284
OEIK01005000
74687
Fusobacteriota
CAA
Leu
>WENV181161260
OEIK01279148
183772
Fusobacteriota
ACG
Arg
>WENV181161091
OEIK01133213
183772
Fusobacteriota
ACG
Arg
>WENV181160769
OEIK01033912
202720
Fusobacteriota
TGG
Pro
>WENV181160367
OEIK01006725
202720
Fusobacteriota
TGG
Pro
>WENV181160706
OEIK01026563
57087
Fusobacteriota
TAA
Leu
>WENV181160866
OEIK01048054
192090
Fusobacteriota
CAT
Met
>WENV181161023
OEIK01090712
288880
Fusobacteriota
CTT
Lys
>WENV181161265
OEIK01279598
47168
Fusobacteriota
GCT
Ser
>WENV181159720
OEIK01000032
404073
Fusobacteriota
TTG
Gln
>WENV181160247
OEIK01003631
404073
Fusobacteriota
TTG
Gln
>WENV181160455
OEIK01008894
404073
Fusobacteriota
TTG
Gln
>WENV181160678
OEIK01023605
228619
Fusobacteriota
TCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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