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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181200055
OERJ01000294
176044
Gammaproteobacteria
GAC
Val
>WENV181200057
OERJ01000297
282633
Gammaproteobacteria
CGT
Thr
>WENV181200107
OERJ01001196
180042
Gammaproteobacteria
TGG
Pro
>WENV181200100
OERJ01000956
280672
Gammaproteobacteria
GGT
Thr
>WENV181200056
OERJ01000294
280668
Gammaproteobacteria
GTT
Asn
>WENV181200075
OERJ01000454
176041
Gammaproteobacteria
CGG
Pro
>WENV181200134
OERJ01002132
60942
Gammaproteobacteria
GGA
Ser
>WENV181200001
OERJ01000026
184266
Gammaproteobacteria
GAC
Val
>WENV181200029
OERJ01000137
496392
Gammaproteobacteria
CCC
Gly
>WENV181200109
OERJ01001227
8505
Gammaproteobacteria
GCT
Ser
>WENV181200054
OERJ01000294
176043
Gammaproteobacteria
GAC
Val
>WENV181200092
OERJ01000634
176040
Gammaproteobacteria
GGG
Pro
>WENV181199993
OERJ01000008
435648
Gammaproteobacteria
CTG
Gln
>WENV181199992
OERJ01000008
435648
Gammaproteobacteria
CTG
Gln
>WENV181200032
OERJ01000148
178024
Gammaproteobacteria
CAT
Met
>WENV181200110
OERJ01001227
176039
Gammaproteobacteria
>WENV181200011
OERJ01000090
140781
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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