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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181208292
OFBB01002693
184105
Campylobacterota
GAT
Ile
>WENV181208159
OFBB01000125
405530
Campylobacterota
GTT
Asn
>WENV181208289
OFBB01002666
289263
Campylobacterota
GTT
Asn
>WENV181208126
OFBB01000031
294047
Campylobacterota
GAA
Phe
>WENV181208120
OFBB01000025
188352
Campylobacterota
GTC
Asp
>WENV181208125
OFBB01000025
188352
Campylobacterota
GTC
Asp
>WENV181208122
OFBB01000025
294045
Campylobacterota
TAC
Val
>WENV181208124
OFBB01000025
294045
Campylobacterota
TAC
Val
>WENV181208293
OFBB01002693
289268
Campylobacterota
TGC
Ala
>WENV181208401
OFBB01008920
176586
Campylobacterota
CAT
Met
>WENV181208153
OFBB01000112
176586
Campylobacterota
CAT
Met
>WENV181208515
OFBB01024046
398990
Campylobacterota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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