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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181216980
OFCH01000004
175907
Actinomycetota
TAC
Val
>WENV181216990
OFCH01000012
280498
Actinomycetota
GTT
Asn
>WENV181217066
OFCH01000182
280498
Actinomycetota
GTT
Asn
>WENV181217019
OFCH01000024
56083
Actinomycetota
CGA
Ser
>WENV181217013
OFCH01000022
140768
Actinomycetota
TAG
Leu
>WENV181216979
OFCH01000003
176075
Actinomycetota
TCT
Arg
>WENV181217010
OFCH01000020
176078
Actinomycetota
GGG
Pro
>WENV181216999
OFCH01000019
280701
Actinomycetota
CCG
Arg
>WENV181217003
OFCH01000019
152047
Actinomycetota
ACG
Arg
>WENV181216976
OFCH01000001
59689
Actinomycetota
GGA
Ser
>WENV181216985
OFCH01000005
175837
Actinomycetota
ACG
Arg
>WENV181216998
OFCH01000019
480373
Actinomycetota
CCA
Trp
>WENV181217018
OFCH01000024
29393
Actinomycetota
GCT
Ser
>WENV181217044
OFCH01000046
280549
Actinomycetota
CAC
Val
>WENV181216972
OFCH01000001
349164
Actinomycetota
CTC
Glu
>WENV181216988
OFCH01000008
398947
Actinomycetota
CCA
Trp
>WENV181216982
OFCH01000005
280702
Actinomycetota
GGC
Ala
>WENV181217025
OFCH01000029
176077
Actinomycetota
CAT
Met
>WENV181216994
OFCH01000017
21508
Actinomycetota
GAG
Leu
>WENV181216993
OFCH01000013
280524
Actinomycetota
TGC
Ala
>WENV181217045
OFCH01000053
398948
Actinomycetota
TTC
Glu
>WENV181217007
OFCH01000019
480374
Actinomycetota
TTG
Gln
>WENV181217011
OFCH01000021
150272
Actinomycetota
TAA
Leu
>WENV181217016
OFCH01000024
117777
Actinomycetota
>WENV181217017
OFCH01000024
175949
Actinomycetota
CAT
Met
>WENV181217000
OFCH01000019
398944
Actinomycetota
CCC
Gly
>WENV181216991
OFCH01000013
191955
Actinomycetota
TGT
Thr
>WENV181216978
OFCH01000003
280544
Actinomycetota
GTG
His
>WENV181217014
OFCH01000022
280496
Actinomycetota
CGT
Thr
>WENV181217026
OFCH01000029
280703
Actinomycetota
CCT
Arg
>WENV181217001
OFCH01000019
152046
Actinomycetota
TTT
Lys
>WENV181216974
OFCH01000001
280450
Actinomycetota
TTT
Lys
>WENV181217043
OFCH01000046
468141
Actinomycetota
GAC
Val
>WENV181217012
OFCH01000022
323758
Actinomycetota
CGT
Thr
>WENV181217041
OFCH01000046
358727
Actinomycetota
CCG
Arg
>WENV181216977
OFCH01000001
99865
Actinomycetota
CAG
Leu
>WENV181216975
OFCH01000001
222475
Actinomycetota
CTT
Lys
>WENV181216983
OFCH01000005
175843
Actinomycetota
CAA
Leu
>WENV181216987
OFCH01000008
3983
Actinomycetota
GCT
Ser
>WENV181217021
OFCH01000025
56075
Actinomycetota
TGA
Ser
>WENV181216973
OFCH01000001
430848
Actinomycetota
CTG
Gln
>WENV181216992
OFCH01000013
179238
Actinomycetota
GAT
Ile
>WENV181216981
OFCH01000005
506175
Actinomycetota
TTG
Gln
>WENV181216971
OFCH01000001
480376
Actinomycetota
CCC
Gly
>WENV181216997
OFCH01000019
117775
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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