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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
120 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181217798
OFCL01000086
481233
Actinomycetota
CCC
Gly
>WENV181217754
OFCL01000041
179231
Actinomycetota
TAC
Val
>WENV181217678
OFCL01000008
176499
Actinomycetota
CAT
Met
>WENV181217736
OFCL01000030
176499
Actinomycetota
CAT
Met
>WENV181217976
OFCL01001284
175883
Actinomycetota
GAT
Ile
>WENV181217978
OFCL01001284
175883
Actinomycetota
GAT
Ile
>WENV181217703
OFCL01000014
283311
Actinomycetota
CCT
Arg
>WENV181217823
OFCL01000126
280498
Actinomycetota
GTT
Asn
>WENV181217688
OFCL01000009
280498
Actinomycetota
GTT
Asn
>WENV181217687
OFCL01000009
280498
Actinomycetota
GTT
Asn
>WENV181217635
OFCL01000002
280498
Actinomycetota
GTT
Asn
>WENV181217862
OFCL01000192
316729
Actinomycetota
CAC
Val
>WENV181217887
OFCL01000334
316729
Actinomycetota
CAC
Val
>WENV181217723
OFCL01000025
280503
Actinomycetota
CCT
Arg
>WENV181217651
OFCL01000004
184065
Actinomycetota
TGG
Pro
>WENV181217781
OFCL01000067
295964
Actinomycetota
GTT
Asn
>WENV181217634
OFCL01000002
295964
Actinomycetota
GTT
Asn
>WENV181217891
OFCL01000357
140768
Actinomycetota
TAG
Leu
>WENV181217776
OFCL01000063
140768
Actinomycetota
TAG
Leu
>WENV181218134
OFCL01012136
284890
Actinomycetota
CTT
Lys
>WENV181217681
OFCL01000008
56384
Actinomycetota
TGA
Ser
>WENV181217804
OFCL01000089
176075
Actinomycetota
TCT
Arg
>WENV181217794
OFCL01000078
176075
Actinomycetota
TCT
Arg
>WENV181217787
OFCL01000074
175848
Actinomycetota
TGG
Pro
>WENV181217706
OFCL01000016
176078
Actinomycetota
GGG
Pro
>WENV181217636
OFCL01000002
176078
Actinomycetota
GGG
Pro
>WENV181217786
OFCL01000074
482604
Actinomycetota
TTG
Gln
>WENV181217780
OFCL01000067
482604
Actinomycetota
TTG
Gln
>WENV181218063
OFCL01004832
284889
Actinomycetota
CTC
Glu
>WENV181217700
OFCL01000012
59689
Actinomycetota
GGA
Ser
>WENV181217749
OFCL01000037
59689
Actinomycetota
GGA
Ser
>WENV181217810
OFCL01000101
175837
Actinomycetota
ACG
Arg
>WENV181217790
OFCL01000074
175837
Actinomycetota
ACG
Arg
>WENV181217712
OFCL01000018
29393
Actinomycetota
GCT
Ser
>WENV181217734
OFCL01000029
280549
Actinomycetota
CAC
Val
>WENV181217629
OFCL01000001
184493
Actinomycetota
GGG
Pro
>WENV181217679
OFCL01000008
24925
Actinomycetota
GCT
Ser
>WENV181217680
OFCL01000008
56383
Actinomycetota
CGA
Ser
>WENV181217769
OFCL01000054
20450
Actinomycetota
GAG
Leu
>WENV181217774
OFCL01000062
280441
Actinomycetota
CCG
Arg
>WENV181217789
OFCL01000074
280702
Actinomycetota
GGC
Ala
>WENV181217788
OFCL01000074
280702
Actinomycetota
GGC
Ala
>WENV181217770
OFCL01000060
140878
Actinomycetota
TAA
Leu
>WENV181217691
OFCL01000011
398843
Actinomycetota
GTT
Asn
>WENV181217692
OFCL01000011
398843
Actinomycetota
GTT
Asn
>WENV181217733
OFCL01000029
434162
Actinomycetota
GAC
Val
>WENV181217672
OFCL01000007
176077
Actinomycetota
CAT
Met
>WENV181217695
OFCL01000011
298224
Actinomycetota
GGC
Ala
>WENV181217730
OFCL01000028
418858
Actinomycetota
CTG
Gln
>WENV181217795
OFCL01000078
283312
Actinomycetota
GTG
His
>WENV181217683
OFCL01000009
176638
Actinomycetota
GGG
Pro
>WENV181217644
OFCL01000003
285876
Actinomycetota
CGT
Thr
>WENV181217743
OFCL01000036
280524
Actinomycetota
TGC
Ala
>WENV181217748
OFCL01000037
283313
Actinomycetota
CCG
Arg
>WENV181217724
OFCL01000026
398948
Actinomycetota
TTC
Glu
>WENV181217674
OFCL01000007
398948
Actinomycetota
TTC
Glu
>WENV181217952
OFCL01000833
150272
Actinomycetota
TAA
Leu
>WENV181217710
OFCL01000018
117777
Actinomycetota
>WENV181217677
OFCL01000008
117777
Actinomycetota
>WENV181218071
OFCL01005991
280744
Actinomycetota
GTG
His
>WENV181217888
OFCL01000334
280523
Actinomycetota
GGC
Ala
>WENV181217782
OFCL01000067
280523
Actinomycetota
GGC
Ala
>WENV181217744
OFCL01000036
280523
Actinomycetota
GGC
Ala
>WENV181217689
OFCL01000010
280523
Actinomycetota
GGC
Ala
>WENV181217711
OFCL01000018
175949
Actinomycetota
CAT
Met
>WENV181217740
OFCL01000034
227544
Actinomycetota
TAC
Val
>WENV181217708
OFCL01000017
227544
Actinomycetota
TAC
Val
>WENV181217818
OFCL01000116
191955
Actinomycetota
TGT
Thr
>WENV181218010
OFCL01002479
180071
Actinomycetota
CAT
Met
>WENV181217718
OFCL01000021
175841
Actinomycetota
TAT
Ile
>WENV181217707
OFCL01000016
20415
Actinomycetota
GAG
Leu
>WENV181217815
OFCL01000105
280544
Actinomycetota
GTG
His
>WENV181217829
OFCL01000142
280536
Actinomycetota
CTT
Lys
>WENV181217830
OFCL01000142
280536
Actinomycetota
CTT
Lys
>WENV181217717
OFCL01000021
175872
Actinomycetota
GTC
Asp
>WENV181217919
OFCL01000578
175872
Actinomycetota
GTC
Asp
>WENV181218014
OFCL01002541
290430
Actinomycetota
TCT
Arg
>WENV181217673
OFCL01000007
280703
Actinomycetota
CCT
Arg
>WENV181217826
OFCL01000134
140879
Actinomycetota
TAG
Leu
>WENV181217739
OFCL01000030
20205
Actinomycetota
GCT
Ser
>WENV181217722
OFCL01000025
175926
Actinomycetota
CAT
Met
>WENV181217727
OFCL01000026
178569
Actinomycetota
CAT
Met
>WENV181217750
OFCL01000038
280450
Actinomycetota
TTT
Lys
>WENV181217696
OFCL01000012
280450
Actinomycetota
TTT
Lys
>WENV181218075
OFCL01006084
124580
Actinomycetota
GTA
Tyr
>WENV181217775
OFCL01000063
323758
Actinomycetota
CGT
Thr
>WENV181217831
OFCL01000143
480329
Actinomycetota
CCC
Gly
>WENV181217785
OFCL01000070
480329
Actinomycetota
CCC
Gly
>WENV181217713
OFCL01000018
56451
Actinomycetota
CGA
Ser
>WENV181217755
OFCL01000042
483206
Actinomycetota
CTG
Gln
>WENV181217686
OFCL01000009
175882
Actinomycetota
TGG
Pro
>WENV181217684
OFCL01000009
20209
Actinomycetota
GAG
Leu
>WENV181218062
OFCL01004670
187640
Actinomycetota
TGT
Thr
>WENV181217623
OFCL01000001
423412
Actinomycetota
GAC
Val
>WENV181218007
OFCL01002422
284887
Actinomycetota
GCC
Gly
>WENV181217797
OFCL01000086
99865
Actinomycetota
CAG
Leu
>WENV181217784
OFCL01000070
99865
Actinomycetota
CAG
Leu
>WENV181217871
OFCL01000246
222475
Actinomycetota
CTT
Lys
>WENV181217697
OFCL01000012
222475
Actinomycetota
CTT
Lys
>WENV181217690
OFCL01000010
480319
Actinomycetota
TTG
Gln
>WENV181217783
OFCL01000068
280499
Actinomycetota
CCT
Arg
>WENV181217822
OFCL01000121
398853
Actinomycetota
CTG
Gln
>WENV181217747
OFCL01000037
398853
Actinomycetota
CTG
Gln
>WENV181217812
OFCL01000102
175843
Actinomycetota
CAA
Leu
>WENV181217771
OFCL01000060
175843
Actinomycetota
CAA
Leu
>WENV181217685
OFCL01000009
175843
Actinomycetota
CAA
Leu
>WENV181217719
OFCL01000021
203883
Actinomycetota
TCT
Arg
>WENV181217738
OFCL01000030
46642
Actinomycetota
CGA
Ser
>WENV181217741
OFCL01000036
104211
Actinomycetota
CAG
Leu
>WENV181217698
OFCL01000012
317680
Actinomycetota
CCG
Arg
>WENV181217811
OFCL01000101
178568
Actinomycetota
ACG
Arg
>WENV181217729
OFCL01000028
289788
Actinomycetota
CTC
Glu
>WENV181217746
OFCL01000037
289788
Actinomycetota
CTC
Glu
>WENV181217735
OFCL01000030
117903
Actinomycetota
GTA
Tyr
>WENV181217737
OFCL01000030
56071
Actinomycetota
TGA
Ser
>WENV181217714
OFCL01000018
60767
Actinomycetota
TGA
Ser
>WENV181217817
OFCL01000111
147796
Actinomycetota
TAA
Leu
>WENV181217890
OFCL01000357
280470
Actinomycetota
CGT
Thr
>WENV181217825
OFCL01000134
280470
Actinomycetota
CGT
Thr
>WENV181217760
OFCL01000045
482493
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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