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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181220369
OFCQ01003104
448352
Bacillota
GCC
Gly
>WENV181220370
OFCQ01003104
480520
Bacillota
TCC
Gly
>WENV181220068
OFCQ01000038
184537
Bacillota
ACG
Arg
>WENV181220062
OFCQ01000037
280428
Bacillota
GAA
Phe
>WENV181220185
OFCQ01000183
408526
Bacillota
GCA
Cys
>WENV181220155
OFCQ01000128
296855
Bacillota
GGT
Thr
>WENV181220171
OFCQ01000154
48505
Bacillota
TGA
Ser
>WENV181220060
OFCQ01000037
280466
Bacillota
TAC
Val
>WENV181220074
OFCQ01000046
289717
Bacillota
CTT
Lys
>WENV181220335
OFCQ01001579
20360
Bacillota
TGA
Ser
>WENV181220391
OFCQ01005029
180920
Bacillota
CAT
Met
>WENV181220330
OFCQ01001391
282752
Bacillota
TTT
Lys
>WENV181220365
OFCQ01002652
46686
Bacillota
TAA
Leu
>WENV181220207
OFCQ01000266
20932
Bacillota
GCT
Ser
>WENV181220183
OFCQ01000183
291553
Bacillota
GAA
Phe
>WENV181220377
OFCQ01003104
141334
Bacillota
TAG
Leu
>WENV181220348
OFCQ01001946
141334
Bacillota
TAG
Leu
>WENV181220306
OFCQ01001112
482593
Bacillota
CCC
Gly
>WENV181220180
OFCQ01000177
20942
Bacillota
GGA
Ser
>WENV181220373
OFCQ01003104
291558
Bacillota
CTT
Lys
>WENV181220318
OFCQ01001281
280871
Bacillota
GAA
Phe
>WENV181220319
OFCQ01001281
400112
Bacillota
GCC
Gly
>WENV181220063
OFCQ01000037
290325
Bacillota
GCC
Gly
>WENV181220059
OFCQ01000037
290325
Bacillota
GCC
Gly
>WENV181220234
OFCQ01000349
21311
Bacillota
GCT
Ser
>WENV181220156
OFCQ01000128
184495
Bacillota
CAT
Met
>WENV181220028
OFCQ01000011
141202
Bacillota
CAA
Leu
>WENV181220389
OFCQ01004518
29614
Bacillota
GGA
Ser
>WENV181220320
OFCQ01001281
480905
Bacillota
TCC
Gly
>WENV181220326
OFCQ01001391
480905
Bacillota
TCC
Gly
>WENV181220345
OFCQ01001913
282756
Bacillota
CTT
Lys
>WENV181220374
OFCQ01003104
281302
Bacillota
GTG
His
>WENV181220152
OFCQ01000128
289713
Bacillota
TGT
Thr
>WENV181220270
OFCQ01000588
404091
Bacillota
TTG
Gln
>WENV181220343
OFCQ01001811
178067
Bacillota
TCG
Arg
>WENV181220269
OFCQ01000588
289716
Bacillota
GTG
His
>WENV181220339
OFCQ01001658
100097
Bacillota
GTA
Tyr
>WENV181220341
OFCQ01001658
100097
Bacillota
GTA
Tyr
>WENV181220336
OFCQ01001579
20361
Bacillota
GCT
Ser
>WENV181220165
OFCQ01000131
303718
Bacillota
TGT
Thr
>WENV181220372
OFCQ01003104
182384
Bacillota
TCT
Arg
>WENV181220218
OFCQ01000311
432453
Bacillota
TTC
Glu
>WENV181220158
OFCQ01000128
432453
Bacillota
TTC
Glu
>WENV181220145
OFCQ01000117
480337
Bacillota
TCC
Gly
>WENV181220070
OFCQ01000038
119459
Bacillota
TAG
Leu
>WENV181220368
OFCQ01002959
117940
Bacillota
GTA
Tyr
>WENV181220376
OFCQ01003104
354380
Bacillota
TTT
Lys
>WENV181220216
OFCQ01000311
333281
Bacillota
GTT
Asn
>WENV181220157
OFCQ01000128
333281
Bacillota
GTT
Asn
>WENV181220328
OFCQ01001391
282757
Bacillota
GTG
His
>WENV181220182
OFCQ01000183
280547
Bacillota
GTC
Asp
>WENV181220215
OFCQ01000311
445407
Bacillota
GCC
Gly
>WENV181220184
OFCQ01000183
445407
Bacillota
GCC
Gly
>WENV181220346
OFCQ01001940
344985
Bacillota
GAA
Phe
>WENV181220217
OFCQ01000311
289761
Bacillota
TTT
Lys
>WENV181220327
OFCQ01001391
176771
Bacillota
TCT
Arg
>WENV181220338
OFCQ01001658
282754
Bacillota
TGT
Thr
>WENV181220340
OFCQ01001658
282754
Bacillota
TGT
Thr
>WENV181220347
OFCQ01001940
484342
Bacillota
GCA
Cys
>WENV181220258
OFCQ01000490
282755
Bacillota
GGT
Thr
>WENV181220219
OFCQ01000311
289715
Bacillota
TAC
Val
>WENV181220159
OFCQ01000128
289715
Bacillota
TAC
Val
>WENV181220288
OFCQ01000836
280476
Bacillota
TTT
Lys
>WENV181220147
OFCQ01000117
20943
Bacillota
CGA
Ser
>WENV181220144
OFCQ01000117
208539
Bacillota
TGG
Pro
>WENV181220146
OFCQ01000117
184539
Bacillota
TCT
Arg
>WENV181220329
OFCQ01001391
400113
Bacillota
TTG
Gln
>WENV181220325
OFCQ01001391
328987
Bacillota
TGG
Pro
>WENV181220387
OFCQ01004194
282751
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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