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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181221141
OFCU01000175
179231
Actinomycetota
TAC
Val
>WENV181221051
OFCU01000054
176499
Actinomycetota
CAT
Met
>WENV181221067
OFCU01000068
176499
Actinomycetota
CAT
Met
>WENV181221204
OFCU01000367
175907
Actinomycetota
TAC
Val
>WENV181221054
OFCU01000057
283311
Actinomycetota
CCT
Arg
>WENV181221135
OFCU01000170
147806
Actinomycetota
TAA
Leu
>WENV181221148
OFCU01000190
280498
Actinomycetota
GTT
Asn
>WENV181221125
OFCU01000152
316729
Actinomycetota
CAC
Val
>WENV181221244
OFCU01000533
184065
Actinomycetota
TGG
Pro
>WENV181221038
OFCU01000034
295964
Actinomycetota
GTT
Asn
>WENV181221283
OFCU01001189
56083
Actinomycetota
CGA
Ser
>WENV181221207
OFCU01000374
140768
Actinomycetota
TAG
Leu
>WENV181221049
OFCU01000051
140768
Actinomycetota
TAG
Leu
>WENV181221033
OFCU01000029
56384
Actinomycetota
TGA
Ser
>WENV181221093
OFCU01000092
176075
Actinomycetota
TCT
Arg
>WENV181221007
OFCU01000012
176075
Actinomycetota
TCT
Arg
>WENV181221209
OFCU01000381
175848
Actinomycetota
TGG
Pro
>WENV181221117
OFCU01000129
176078
Actinomycetota
GGG
Pro
>WENV181221061
OFCU01000063
176078
Actinomycetota
GGG
Pro
>WENV181221214
OFCU01000409
482604
Actinomycetota
TTG
Gln
>WENV181221037
OFCU01000034
482604
Actinomycetota
TTG
Gln
>WENV181221105
OFCU01000100
59689
Actinomycetota
GGA
Ser
>WENV181221006
OFCU01000011
59689
Actinomycetota
GGA
Ser
>WENV181221248
OFCU01000648
175837
Actinomycetota
ACG
Arg
>WENV181221212
OFCU01000404
29393
Actinomycetota
GCT
Ser
>WENV181221174
OFCU01000249
280549
Actinomycetota
CAC
Val
>WENV181221032
OFCU01000029
56383
Actinomycetota
CGA
Ser
>WENV181221296
OFCU01001671
280702
Actinomycetota
GGC
Ala
>WENV181221215
OFCU01000409
280702
Actinomycetota
GGC
Ala
>WENV181220975
OFCU01000001
140878
Actinomycetota
TAA
Leu
>WENV181221173
OFCU01000249
434162
Actinomycetota
GAC
Val
>WENV181221234
OFCU01000468
176077
Actinomycetota
CAT
Met
>WENV181221008
OFCU01000012
283312
Actinomycetota
GTG
His
>WENV181221169
OFCU01000246
21508
Actinomycetota
GAG
Leu
>WENV181221062
OFCU01000065
63367
Actinomycetota
GGA
Ser
>WENV181221060
OFCU01000062
281635
Actinomycetota
GGC
Ala
>WENV181221109
OFCU01000107
176638
Actinomycetota
GGG
Pro
>WENV181221164
OFCU01000220
285876
Actinomycetota
CGT
Thr
>WENV181221182
OFCU01000268
280524
Actinomycetota
TGC
Ala
>WENV181221153
OFCU01000201
280524
Actinomycetota
TGC
Ala
>WENV181221003
OFCU01000011
283313
Actinomycetota
CCG
Arg
>WENV181221073
OFCU01000073
398948
Actinomycetota
TTC
Glu
>WENV181221272
OFCU01000928
398948
Actinomycetota
TTC
Glu
>WENV181221161
OFCU01000218
150272
Actinomycetota
TAA
Leu
>WENV181221210
OFCU01000404
117777
Actinomycetota
>WENV181221050
OFCU01000054
117777
Actinomycetota
>WENV181221183
OFCU01000268
280523
Actinomycetota
GGC
Ala
>WENV181221166
OFCU01000230
280523
Actinomycetota
GGC
Ala
>WENV181221036
OFCU01000034
280523
Actinomycetota
GGC
Ala
>WENV181221211
OFCU01000404
175949
Actinomycetota
CAT
Met
>WENV181220977
OFCU01000001
227544
Actinomycetota
TAC
Val
>WENV181221039
OFCU01000038
176555
Actinomycetota
CAT
Met
>WENV181221044
OFCU01000045
20415
Actinomycetota
GAG
Leu
>WENV181221208
OFCU01000374
280496
Actinomycetota
CGT
Thr
>WENV181221123
OFCU01000147
280703
Actinomycetota
CCT
Arg
>WENV181221025
OFCU01000023
140879
Actinomycetota
TAG
Leu
>WENV181221052
OFCU01000054
20205
Actinomycetota
GCT
Ser
>WENV181221043
OFCU01000044
178569
Actinomycetota
CAT
Met
>WENV181221186
OFCU01000289
280450
Actinomycetota
TTT
Lys
>WENV181221206
OFCU01000374
323758
Actinomycetota
CGT
Thr
>WENV181221130
OFCU01000159
56166
Actinomycetota
TGA
Ser
>WENV181221034
OFCU01000030
480329
Actinomycetota
CCC
Gly
>WENV181221216
OFCU01000411
175882
Actinomycetota
TGG
Pro
>WENV181221035
OFCU01000030
99865
Actinomycetota
CAG
Leu
>WENV181221290
OFCU01001299
99865
Actinomycetota
CAG
Leu
>WENV181221194
OFCU01000335
222475
Actinomycetota
CTT
Lys
>WENV181221005
OFCU01000011
222475
Actinomycetota
CTT
Lys
>WENV181221046
OFCU01000051
280489
Actinomycetota
CTC
Glu
>WENV181221249
OFCU01000673
280499
Actinomycetota
CCT
Arg
>WENV181221254
OFCU01000676
398853
Actinomycetota
CTG
Gln
>WENV181221047
OFCU01000051
398853
Actinomycetota
CTG
Gln
>WENV181221002
OFCU01000011
398853
Actinomycetota
CTG
Gln
>WENV181221256
OFCU01000698
176642
Actinomycetota
CAA
Leu
>WENV181220976
OFCU01000001
175843
Actinomycetota
CAA
Leu
>WENV181221040
OFCU01000038
203883
Actinomycetota
TCT
Arg
>WENV181221187
OFCU01000290
46642
Actinomycetota
CGA
Ser
>WENV181221196
OFCU01000338
104211
Actinomycetota
CAG
Leu
>WENV181221171
OFCU01000249
317680
Actinomycetota
CCG
Arg
>WENV181221111
OFCU01000114
317680
Actinomycetota
CCG
Arg
>WENV181221066
OFCU01000068
117903
Actinomycetota
GTA
Tyr
>WENV181221048
OFCU01000051
280470
Actinomycetota
CGT
Thr
>WENV181221024
OFCU01000023
280470
Actinomycetota
CGT
Thr
>WENV181221185
OFCU01000283
480376
Actinomycetota
CCC
Gly
>WENV181221190
OFCU01000329
482493
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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