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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181236717
OFEZ01006623
118683
Bacillota
GTA
Tyr
>WENV181236306
OFEZ01000220
416763
Bacillota
CTC
Glu
>WENV181236735
OFEZ01007578
343590
Bacillota
GCC
Gly
>WENV181236503
OFEZ01001555
356660
Bacillota
CTT
Lys
>WENV181236504
OFEZ01001555
356660
Bacillota
CTT
Lys
>WENV181236707
OFEZ01005927
56397
Bacillota
CAA
Leu
>WENV181236835
OFEZ01016708
229015
Bacillota
GTG
His
>WENV181236674
OFEZ01004829
407852
Bacillota
TTC
Glu
>WENV181236970
OFEZ01053964
406553
Bacillota
TTG
Gln
>WENV181236370
OFEZ01000457
73664
Bacillota
CAG
Leu
>WENV181236706
OFEZ01005927
501142
Bacillota
GCA
Cys
>WENV181236580
OFEZ01002460
129143
Bacillota
TAG
Leu
>WENV181236943
OFEZ01045008
319117
Bacillota
TGC
Ala
>WENV181236518
OFEZ01001687
284627
Bacillota
GAA
Phe
>WENV181236526
OFEZ01001740
301839
Bacillota
GTG
His
>WENV181236789
OFEZ01011181
287280
Bacillota
TGT
Thr
>WENV181236339
OFEZ01000332
120213
Bacillota
GTA
Tyr
>WENV181236926
OFEZ01038835
400963
Bacillota
GTT
Asn
>WENV181236690
OFEZ01005065
175911
Bacillota
GTC
Asp
>WENV181236755
OFEZ01008950
317482
Bacillota
TAC
Val
>WENV181236657
OFEZ01004176
58120
Bacillota
AAG
Leu
>WENV181236525
OFEZ01001740
330582
Bacillota
GTC
Asp
>WENV181236576
OFEZ01002408
105208
Bacillota
GTA
Tyr
>WENV181236834
OFEZ01016641
46835
Bacillota
TAA
Leu
>WENV181236395
OFEZ01000607
25955
Bacillota
GCT
Ser
>WENV181236240
OFEZ01000068
118669
Bacillota
GTA
Tyr
>WENV181236767
OFEZ01009770
294275
Bacillota
TGC
Ala
>WENV181236584
OFEZ01002460
178962
Bacillota
ACG
Arg
>WENV181236818
OFEZ01015037
332651
Bacillota
GTT
Asn
>WENV181236959
OFEZ01051004
201856
Bacillota
GAT
Ile
>WENV181236649
OFEZ01003983
175857
Bacillota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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