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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181244892
OFFI01002869
343590
Bacillota
GCC
Gly
>WENV181244824
OFFI01001521
356660
Bacillota
CTT
Lys
>WENV181244825
OFFI01001521
356660
Bacillota
CTT
Lys
>WENV181244611
OFFI01000319
56397
Bacillota
CAA
Leu
>WENV181244480
OFFI01000103
229015
Bacillota
GTG
His
>WENV181244616
OFFI01000325
179917
Bacillota
CAT
Met
>WENV181245285
OFFI01062029
236579
Bacillota
GAT
Ile
>WENV181244960
OFFI01005235
348419
Bacillota
GTT
Asn
>WENV181244600
OFFI01000319
407852
Bacillota
TTC
Glu
>WENV181244607
OFFI01000319
407852
Bacillota
TTC
Glu
>WENV181244554
OFFI01000217
179176
Bacillota
ACG
Arg
>WENV181244854
OFFI01001871
285947
Bacillota
CTG
Gln
>WENV181245046
OFFI01009492
283493
Bacillota
CTC
Glu
>WENV181244540
OFFI01000198
20358
Bacillota
CGA
Ser
>WENV181245260
OFFI01048866
501142
Bacillota
GCA
Cys
>WENV181245064
OFFI01010932
284627
Bacillota
GAA
Phe
>WENV181244601
OFFI01000319
282730
Bacillota
TAC
Val
>WENV181244610
OFFI01000319
301839
Bacillota
GTG
His
>WENV181245258
OFFI01048866
301839
Bacillota
GTG
His
>WENV181244672
OFFI01000542
120213
Bacillota
GTA
Tyr
>WENV181245263
OFFI01051749
400963
Bacillota
GTT
Asn
>WENV181245029
OFFI01008437
303718
Bacillota
TGT
Thr
>WENV181245034
OFFI01008609
175911
Bacillota
GTC
Asp
>WENV181244963
OFFI01005235
175911
Bacillota
GTC
Asp
>WENV181244845
OFFI01001655
317482
Bacillota
TAC
Val
>WENV181245257
OFFI01048866
480918
Bacillota
>WENV181245129
OFFI01018084
58120
Bacillota
AAG
Leu
>WENV181244602
OFFI01000319
330582
Bacillota
GTC
Asp
>WENV181244609
OFFI01000319
330582
Bacillota
GTC
Asp
>WENV181245256
OFFI01048866
105208
Bacillota
GTA
Tyr
>WENV181244688
OFFI01000624
46835
Bacillota
TAA
Leu
>WENV181244683
OFFI01000597
25955
Bacillota
GCT
Ser
>WENV181245222
OFFI01037130
118669
Bacillota
GTA
Tyr
>WENV181244687
OFFI01000624
118669
Bacillota
GTA
Tyr
>WENV181245068
OFFI01011087
294275
Bacillota
TGC
Ala
>WENV181244793
OFFI01001210
52748
Bacillota
TGA
Ser
>WENV181244574
OFFI01000267
332651
Bacillota
GTT
Asn
>WENV181244606
OFFI01000319
21320
Bacillota
GCT
Ser
>WENV181245236
OFFI01040564
201856
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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