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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181288948
OFGZ01002957
416763
Bacillota
CTC
Glu
>WENV181289123
OFGZ01009199
212982
Bacillota
ACG
Arg
>WENV181288756
OFGZ01000950
343590
Bacillota
GCC
Gly
>WENV181289067
OFGZ01006854
356660
Bacillota
CTT
Lys
>WENV181289179
OFGZ01014073
141454
Bacillota
TAG
Leu
>WENV181289284
OFGZ01033652
141454
Bacillota
TAG
Leu
>WENV181288891
OFGZ01002144
229015
Bacillota
GTG
His
>WENV181289069
OFGZ01006883
214241
Bacillota
GTC
Asp
>WENV181289083
OFGZ01007285
459011
Bacillota
TGT
Thr
>WENV181289080
OFGZ01007285
298270
Bacillota
TAC
Val
>WENV181288522
OFGZ01000180
179176
Bacillota
ACG
Arg
>WENV181289180
OFGZ01014073
176014
Bacillota
TCT
Arg
>WENV181288626
OFGZ01000433
481217
Bacillota
GCA
Cys
>WENV181289101
OFGZ01007948
280646
Bacillota
TGC
Ala
>WENV181289082
OFGZ01007285
280641
Bacillota
GTT
Asn
>WENV181289221
OFGZ01019913
21311
Bacillota
GCT
Ser
>WENV181289126
OFGZ01009199
282867
Bacillota
TGT
Thr
>WENV181288784
OFGZ01001127
120213
Bacillota
GTA
Tyr
>WENV181289124
OFGZ01009199
178143
Bacillota
TTC
Glu
>WENV181289198
OFGZ01017257
175911
Bacillota
GTC
Asp
>WENV181288464
OFGZ01000114
204381
Bacillota
GAT
Ile
>WENV181288462
OFGZ01000114
204381
Bacillota
GAT
Ile
>WENV181288949
OFGZ01002964
58120
Bacillota
AAG
Leu
>WENV181289163
OFGZ01011700
330582
Bacillota
GTC
Asp
>WENV181289259
OFGZ01026616
294275
Bacillota
TGC
Ala
>WENV181288492
OFGZ01000143
285601
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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