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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181297151
OFHK01012682
184090
Thermodesulfobacteriota
GTC
Asp
>WENV181297508
OFHK01056851
184090
Thermodesulfobacteriota
GTC
Asp
>WENV181296938
OFHK01002698
184094
Thermodesulfobacteriota
CAT
Met
>WENV181297395
OFHK01038110
184094
Thermodesulfobacteriota
CAT
Met
>WENV181296875
OFHK01001357
482500
Thermodesulfobacteriota
GCA
Cys
>WENV181297050
OFHK01006636
403835
Thermodesulfobacteriota
GAC
Val
>WENV181297317
OFHK01028215
57144
Thermodesulfobacteriota
CGA
Ser
>WENV181297140
OFHK01011730
403707
Thermodesulfobacteriota
TTC
Glu
>WENV181297517
OFHK01058869
197356
Thermodesulfobacteriota
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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