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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181330997
OFLZ01000318
99852
Bacillota
GTA
Tyr
>WENV181330993
OFLZ01000318
349107
Bacillota
GCC
Gly
>WENV181330995
OFLZ01000318
349107
Bacillota
GCC
Gly
>WENV181330996
OFLZ01000318
405363
Bacillota
GCA
Cys
>WENV181330992
OFLZ01000318
280428
Bacillota
GAA
Phe
>WENV181331683
OFLZ01019849
280492
Bacillota
CTT
Lys
>WENV181331306
OFLZ01001669
175842
Bacillota
CAC
Val
>WENV181331263
OFLZ01001440
348419
Bacillota
GTT
Asn
>WENV181331317
OFLZ01001810
184497
Bacillota
GGG
Pro
>WENV181330769
OFLZ01000042
184497
Bacillota
GGG
Pro
>WENV181330950
OFLZ01000233
179176
Bacillota
ACG
Arg
>WENV181331241
OFLZ01001258
184687
Bacillota
CAT
Met
>WENV181330705
OFLZ01000012
215243
Bacillota
CAT
Met
>WENV181331358
OFLZ01002275
190476
Bacillota
CAT
Met
>WENV181331097
OFLZ01000573
284506
Bacillota
CCA
Trp
>WENV181331005
OFLZ01000334
73664
Bacillota
CAG
Leu
>WENV181331724
OFLZ01029209
280447
Bacillota
GAC
Val
>WENV181331016
OFLZ01000374
5692
Bacillota
GCT
Ser
>WENV181331868
OFLZ01060298
175825
Bacillota
GAT
Ile
>WENV181330666
OFLZ01000005
280427
Bacillota
TAC
Val
>WENV181331240
OFLZ01001258
284723
Bacillota
TAC
Val
>WENV181330699
OFLZ01000009
284723
Bacillota
TAC
Val
>WENV181331208
OFLZ01001065
73009
Bacillota
CAG
Leu
>WENV181331743
OFLZ01032810
481217
Bacillota
GCA
Cys
>WENV181331575
OFLZ01009689
407726
Bacillota
CTG
Gln
>WENV181331383
OFLZ01002659
407726
Bacillota
CTG
Gln
>WENV181330846
OFLZ01000092
291581
Bacillota
CGG
Pro
>WENV181331120
OFLZ01000632
175859
Bacillota
TCT
Arg
>WENV181331867
OFLZ01060298
280436
Bacillota
TGC
Ala
>WENV181330669
OFLZ01000005
290325
Bacillota
GCC
Gly
>WENV181331322
OFLZ01001886
21311
Bacillota
GCT
Ser
>WENV181330863
OFLZ01000121
175831
Bacillota
ACG
Arg
>WENV181331660
OFLZ01016410
295350
Bacillota
TGC
Ala
>WENV181330978
OFLZ01000299
179706
Bacillota
CAT
Met
>WENV181331801
OFLZ01044700
484885
Bacillota
TCC
Gly
>WENV181331101
OFLZ01000582
480322
Bacillota
CTG
Gln
>WENV181330845
OFLZ01000092
480322
Bacillota
CTG
Gln
>WENV181330756
OFLZ01000039
401685
Bacillota
TTG
Gln
>WENV181331512
OFLZ01006286
175868
Bacillota
GTT
Asn
>WENV181331587
OFLZ01010494
322848
Bacillota
CTT
Lys
>WENV181331511
OFLZ01006286
398854
Bacillota
CTC
Glu
>WENV181331309
OFLZ01001702
291576
Bacillota
CCC
Gly
>WENV181331157
OFLZ01000814
400963
Bacillota
GTT
Asn
>WENV181331627
OFLZ01013365
497729
Bacillota
CCA
Trp
>WENV181331592
OFLZ01010728
497729
Bacillota
CCA
Trp
>WENV181331349
OFLZ01002053
497729
Bacillota
CCA
Trp
>WENV181331259
OFLZ01001375
497729
Bacillota
CCA
Trp
>WENV181331166
OFLZ01000845
497729
Bacillota
CCA
Trp
>WENV181331108
OFLZ01000613
497729
Bacillota
CCA
Trp
>WENV181330808
OFLZ01000055
180688
Bacillota
GTC
Asp
>WENV181331509
OFLZ01006265
303718
Bacillota
TGT
Thr
>WENV181330954
OFLZ01000247
303718
Bacillota
TGT
Thr
>WENV181331523
OFLZ01006659
73638
Bacillota
AAG
Leu
>WENV181331666
OFLZ01016719
56079
Bacillota
AAG
Leu
>WENV181331576
OFLZ01009813
323864
Bacillota
TGC
Ala
>WENV181331079
OFLZ01000524
175911
Bacillota
GTC
Asp
>WENV181330974
OFLZ01000299
46655
Bacillota
TGA
Ser
>WENV181331670
OFLZ01017159
292374
Bacillota
TGC
Ala
>WENV181331126
OFLZ01000669
398857
Bacillota
TTC
Glu
>WENV181331642
OFLZ01014497
204381
Bacillota
GAT
Ile
>WENV181331449
OFLZ01004009
117745
Bacillota
GTA
Tyr
>WENV181331257
OFLZ01001348
280444
Bacillota
GGT
Thr
>WENV181330814
OFLZ01000057
342104
Bacillota
TAC
Val
>WENV181330890
OFLZ01000155
321753
Bacillota
GCC
Gly
>WENV181331164
OFLZ01000839
179755
Bacillota
CCG
Arg
>WENV181331072
OFLZ01000485
58120
Bacillota
AAG
Leu
>WENV181331057
OFLZ01000457
58120
Bacillota
AAG
Leu
>WENV181331131
OFLZ01000669
46835
Bacillota
TAA
Leu
>WENV181331603
OFLZ01011826
235661
Bacillota
GTC
Asp
>WENV181330991
OFLZ01000316
330413
Bacillota
CTT
Lys
>WENV181331359
OFLZ01002275
398832
Bacillota
TTC
Glu
>WENV181331025
OFLZ01000383
280476
Bacillota
TTT
Lys
>WENV181331391
OFLZ01002824
332651
Bacillota
GTT
Asn
>WENV181331514
OFLZ01006439
280462
Bacillota
GAA
Phe
>WENV181331335
OFLZ01001974
398852
Bacillota
CTC
Glu
>WENV181331334
OFLZ01001974
398852
Bacillota
CTC
Glu
>WENV181331669
OFLZ01017159
201856
Bacillota
GAT
Ile
>WENV181331606
OFLZ01011826
444984
Bacillota
GCC
Gly
>WENV181331501
OFLZ01005978
285601
Bacillota
TTC
Glu
>WENV181330755
OFLZ01000039
175857
Bacillota
GTG
His
>WENV181330649
OFLZ01000001
285756
Bacillota
GCC
Gly
>WENV181331390
OFLZ01002784
398833
Bacillota
TGT
Thr
>WENV181331256
OFLZ01001348
175849
Bacillota
GTC
Asp
>WENV181330994
OFLZ01000318
175849
Bacillota
GTC
Asp
>WENV181331015
OFLZ01000374
56074
Bacillota
TGA
Ser
>WENV181331628
OFLZ01013536
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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