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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181536935
OGHW01001066
178658
Actinomycetota
CAA
Leu
>WENV181537130
OGHW01002350
179231
Actinomycetota
TAC
Val
>WENV181536609
OGHW01000163
176499
Actinomycetota
CAT
Met
>WENV181536892
OGHW01000914
280498
Actinomycetota
GTT
Asn
>WENV181536893
OGHW01000914
280498
Actinomycetota
GTT
Asn
>WENV181536645
OGHW01000246
140768
Actinomycetota
TAG
Leu
>WENV181536871
OGHW01000806
175837
Actinomycetota
ACG
Arg
>WENV181537036
OGHW01001648
280441
Actinomycetota
CCG
Arg
>WENV181536917
OGHW01000988
176638
Actinomycetota
GGG
Pro
>WENV181536628
OGHW01000214
280524
Actinomycetota
TGC
Ala
>WENV181537210
OGHW01003184
176723
Actinomycetota
TCT
Arg
>WENV181536533
OGHW01000071
281239
Actinomycetota
TTT
Lys
>WENV181536629
OGHW01000214
280523
Actinomycetota
GGC
Ala
>WENV181536610
OGHW01000163
20205
Actinomycetota
GCT
Ser
>WENV181536781
OGHW01000468
480329
Actinomycetota
CCC
Gly
>WENV181536875
OGHW01000816
175882
Actinomycetota
TGG
Pro
>WENV181537139
OGHW01002445
480319
Actinomycetota
TTG
Gln
>WENV181536823
OGHW01000587
280489
Actinomycetota
CTC
Glu
>WENV181536800
OGHW01000518
280499
Actinomycetota
CCT
Arg
>WENV181536824
OGHW01000587
398853
Actinomycetota
CTG
Gln
>WENV181536608
OGHW01000163
117903
Actinomycetota
GTA
Tyr
>WENV181537125
OGHW01002229
147796
Actinomycetota
TAA
Leu
>WENV181536644
OGHW01000246
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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