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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
123 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181541781
OGIE01000042
510477
Bacillota
TCC
Gly
>WENV181542787
OGIE01003454
99852
Bacillota
GTA
Tyr
>WENV181543021
OGIE01005797
99852
Bacillota
GTA
Tyr
>WENV181541879
OGIE01000145
343590
Bacillota
GCC
Gly
>WENV181542429
OGIE01001564
343590
Bacillota
GCC
Gly
>WENV181542919
OGIE01004394
343590
Bacillota
GCC
Gly
>WENV181543680
OGIE01044396
280500
Bacillota
TGC
Ala
>WENV181543422
OGIE01014878
405363
Bacillota
GCA
Cys
>WENV181541663
OGIE01000001
229015
Bacillota
GTG
His
>WENV181543572
OGIE01025629
179917
Bacillota
CAT
Met
>WENV181542815
OGIE01003602
284746
Bacillota
CTG
Gln
>WENV181543159
OGIE01007265
280492
Bacillota
CTT
Lys
>WENV181542829
OGIE01003712
280492
Bacillota
CTT
Lys
>WENV181542756
OGIE01003150
280492
Bacillota
CTT
Lys
>WENV181543200
OGIE01008047
175842
Bacillota
CAC
Val
>WENV181542940
OGIE01004623
175842
Bacillota
CAC
Val
>WENV181541841
OGIE01000100
291629
Bacillota
CCA
Trp
>WENV181543570
OGIE01025593
236579
Bacillota
GAT
Ile
>WENV181542183
OGIE01000727
184497
Bacillota
GGG
Pro
>WENV181543230
OGIE01008574
179176
Bacillota
ACG
Arg
>WENV181542485
OGIE01001793
179176
Bacillota
ACG
Arg
>WENV181542407
OGIE01001469
352588
Bacillota
CAT
Met
>WENV181543763
OGIE01062862
184687
Bacillota
CAT
Met
>WENV181543569
OGIE01025593
295166
Bacillota
TGC
Ala
>WENV181542118
OGIE01000570
82124
Bacillota
TAA
Leu
>WENV181541667
OGIE01000001
73664
Bacillota
CAG
Leu
>WENV181543308
OGIE01010315
280447
Bacillota
GAC
Val
>WENV181543287
OGIE01009684
280447
Bacillota
GAC
Val
>WENV181543150
OGIE01007140
280447
Bacillota
GAC
Val
>WENV181542802
OGIE01003541
280447
Bacillota
GAC
Val
>WENV181543216
OGIE01008292
5692
Bacillota
GCT
Ser
>WENV181542728
OGIE01002901
5692
Bacillota
GCT
Ser
>WENV181542630
OGIE01002408
5692
Bacillota
GCT
Ser
>WENV181542004
OGIE01000313
312274
Bacillota
GGC
Ala
>WENV181542103
OGIE01000503
186123
Bacillota
GTC
Asp
>WENV181541839
OGIE01000100
186123
Bacillota
GTC
Asp
>WENV181543754
OGIE01060682
175825
Bacillota
GAT
Ile
>WENV181541944
OGIE01000219
284723
Bacillota
TAC
Val
>WENV181543036
OGIE01006103
73009
Bacillota
CAG
Leu
>WENV181542135
OGIE01000605
481217
Bacillota
GCA
Cys
>WENV181542946
OGIE01004694
407726
Bacillota
CTG
Gln
>WENV181543146
OGIE01007072
291581
Bacillota
CGG
Pro
>WENV181542770
OGIE01003252
291581
Bacillota
CGG
Pro
>WENV181542601
OGIE01002300
291581
Bacillota
CGG
Pro
>WENV181542847
OGIE01003843
175859
Bacillota
TCT
Arg
>WENV181542701
OGIE01002686
175859
Bacillota
TCT
Arg
>WENV181543753
OGIE01060682
280436
Bacillota
TGC
Ala
>WENV181541862
OGIE01000124
290325
Bacillota
GCC
Gly
>WENV181542486
OGIE01001794
175831
Bacillota
ACG
Arg
>WENV181542035
OGIE01000350
332181
Bacillota
TGT
Thr
>WENV181542791
OGIE01003486
284627
Bacillota
GAA
Phe
>WENV181542104
OGIE01000503
291634
Bacillota
GAA
Phe
>WENV181541829
OGIE01000091
346451
Bacillota
TTT
Lys
>WENV181541687
OGIE01000007
346451
Bacillota
TTT
Lys
>WENV181543459
OGIE01016599
27216
Bacillota
GCT
Ser
>WENV181542875
OGIE01004084
27216
Bacillota
GCT
Ser
>WENV181542363
OGIE01001281
27216
Bacillota
GCT
Ser
>WENV181542941
OGIE01004656
484885
Bacillota
TCC
Gly
>WENV181543432
OGIE01015426
480322
Bacillota
CTG
Gln
>WENV181543145
OGIE01007072
480322
Bacillota
CTG
Gln
>WENV181543067
OGIE01006215
480322
Bacillota
CTG
Gln
>WENV181542993
OGIE01005400
480322
Bacillota
CTG
Gln
>WENV181542769
OGIE01003252
480322
Bacillota
CTG
Gln
>WENV181542737
OGIE01002992
480322
Bacillota
CTG
Gln
>WENV181542600
OGIE01002300
480322
Bacillota
CTG
Gln
>WENV181541945
OGIE01000219
187364
Bacillota
CAT
Met
>WENV181543339
OGIE01011677
175868
Bacillota
GTT
Asn
>WENV181543311
OGIE01010589
175868
Bacillota
GTT
Asn
>WENV181543277
OGIE01009479
175868
Bacillota
GTT
Asn
>WENV181542976
OGIE01005087
175868
Bacillota
GTT
Asn
>WENV181542805
OGIE01003552
175868
Bacillota
GTT
Asn
>WENV181543618
OGIE01030557
284744
Bacillota
TTT
Lys
>WENV181543338
OGIE01011677
398854
Bacillota
CTC
Glu
>WENV181543310
OGIE01010589
398854
Bacillota
CTC
Glu
>WENV181542975
OGIE01005087
398854
Bacillota
CTC
Glu
>WENV181542804
OGIE01003552
398854
Bacillota
CTC
Glu
>WENV181542798
OGIE01003526
291576
Bacillota
CCC
Gly
>WENV181542478
OGIE01001763
291576
Bacillota
CCC
Gly
>WENV181542771
OGIE01003252
480324
Bacillota
TTG
Gln
>WENV181542662
OGIE01002542
480324
Bacillota
TTG
Gln
>WENV181542258
OGIE01000929
497729
Bacillota
CCA
Trp
>WENV181541918
OGIE01000192
303718
Bacillota
TGT
Thr
>WENV181543555
OGIE01023814
73638
Bacillota
AAG
Leu
>WENV181543142
OGIE01007048
56079
Bacillota
AAG
Leu
>WENV181543239
OGIE01008792
179935
Bacillota
GTC
Asp
>WENV181541970
OGIE01000252
398857
Bacillota
TTC
Glu
>WENV181542389
OGIE01001376
117745
Bacillota
GTA
Tyr
>WENV181543465
OGIE01016802
280444
Bacillota
GGT
Thr
>WENV181543098
OGIE01006725
280444
Bacillota
GGT
Thr
>WENV181542526
OGIE01001945
280444
Bacillota
GGT
Thr
>WENV181543382
OGIE01013116
483485
Bacillota
CCC
Gly
>WENV181541960
OGIE01000244
483485
Bacillota
CCC
Gly
>WENV181541921
OGIE01000192
321753
Bacillota
GCC
Gly
>WENV181543149
OGIE01007139
179755
Bacillota
CCG
Arg
>WENV181543246
OGIE01008792
401111
Bacillota
TTC
Glu
>WENV181542066
OGIE01000441
46835
Bacillota
TAA
Leu
>WENV181543240
OGIE01008792
284742
Bacillota
GAA
Phe
>WENV181543157
OGIE01007240
398832
Bacillota
TTC
Glu
>WENV181542395
OGIE01001395
398832
Bacillota
TTC
Glu
>WENV181543187
OGIE01007794
118669
Bacillota
GTA
Tyr
>WENV181542147
OGIE01000661
118669
Bacillota
GTA
Tyr
>WENV181542740
OGIE01003034
283367
Bacillota
GCC
Gly
>WENV181543227
OGIE01008515
398852
Bacillota
CTC
Glu
>WENV181542826
OGIE01003700
398852
Bacillota
CTC
Glu
>WENV181543708
OGIE01050830
201856
Bacillota
GAT
Ile
>WENV181542038
OGIE01000350
289123
Bacillota
GGT
Thr
>WENV181541882
OGIE01000152
360353
Bacillota
CTT
Lys
>WENV181543549
OGIE01023160
280483
Bacillota
GAA
Phe
>WENV181543226
OGIE01008506
298260
Bacillota
GTT
Asn
>WENV181543713
OGIE01051215
175857
Bacillota
GTG
His
>WENV181543550
OGIE01023160
285756
Bacillota
GCC
Gly
>WENV181543009
OGIE01005665
398833
Bacillota
TGT
Thr
>WENV181543642
OGIE01035088
280486
Bacillota
TGC
Ala
>WENV181541840
OGIE01000100
405393
Bacillota
GCC
Gly
>WENV181541802
OGIE01000065
405393
Bacillota
GCC
Gly
>WENV181543215
OGIE01008292
56074
Bacillota
TGA
Ser
>WENV181542727
OGIE01002901
56074
Bacillota
TGA
Ser
>WENV181542629
OGIE01002408
56074
Bacillota
TGA
Ser
>WENV181543761
OGIE01062328
280473
Bacillota
TGG
Pro
>WENV181543357
OGIE01012248
280473
Bacillota
TGG
Pro
>WENV181543351
OGIE01012108
280473
Bacillota
TGG
Pro
>WENV181543076
OGIE01006368
280473
Bacillota
TGG
Pro
>WENV181542046
OGIE01000373
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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