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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181550308
OGIM01000748
180990
Bacillota
CGG
Pro
>WENV181550430
OGIM01004076
283494
Bacillota
GTT
Asn
>WENV181550416
OGIM01003637
280500
Bacillota
TGC
Ala
>WENV181550204
OGIM01000060
405363
Bacillota
GCA
Cys
>WENV181550448
OGIM01004150
487072
Bacillota
GCA
Cys
>WENV181550431
OGIM01004076
8730
Bacillota
GGA
Ser
>WENV181550185
OGIM01000039
280428
Bacillota
GAA
Phe
>WENV181550560
OGIM01013257
291579
Bacillota
GAA
Phe
>WENV181550449
OGIM01004150
56397
Bacillota
CAA
Leu
>WENV181550556
OGIM01013000
296855
Bacillota
GGT
Thr
>WENV181550154
OGIM01000005
175842
Bacillota
CAC
Val
>WENV181550461
OGIM01004934
29930
Bacillota
GGA
Ser
>WENV181550432
OGIM01004076
407852
Bacillota
TTC
Glu
>WENV181550588
OGIM01019099
179563
Bacillota
GAT
Ile
>WENV181550409
OGIM01003438
20932
Bacillota
GCT
Ser
>WENV181550587
OGIM01019099
295166
Bacillota
TGC
Ala
>WENV181550348
OGIM01001215
283493
Bacillota
CTC
Glu
>WENV181550280
OGIM01000405
190476
Bacillota
CAT
Met
>WENV181550256
OGIM01000258
280447
Bacillota
GAC
Val
>WENV181550544
OGIM01011623
156218
Bacillota
GAT
Ile
>WENV181550255
OGIM01000258
5692
Bacillota
GCT
Ser
>WENV181550407
OGIM01003319
186123
Bacillota
GTC
Asp
>WENV181550179
OGIM01000030
73009
Bacillota
CAG
Leu
>WENV181550559
OGIM01013089
283738
Bacillota
CGT
Thr
>WENV181550219
OGIM01000095
291581
Bacillota
CGG
Pro
>WENV181550151
OGIM01000005
175859
Bacillota
TCT
Arg
>WENV181550446
OGIM01004150
285949
Bacillota
GTG
His
>WENV181550277
OGIM01000380
175831
Bacillota
ACG
Arg
>WENV181550557
OGIM01013000
184495
Bacillota
CAT
Met
>WENV181550577
OGIM01017196
141202
Bacillota
CAA
Leu
>WENV181550433
OGIM01004076
285948
Bacillota
CGT
Thr
>WENV181550363
OGIM01001554
180992
Bacillota
CCT
Arg
>WENV181550526
OGIM01009938
404091
Bacillota
TTG
Gln
>WENV181550182
OGIM01000031
175868
Bacillota
GTT
Asn
>WENV181550525
OGIM01009938
289716
Bacillota
GTG
His
>WENV181550437
OGIM01004110
119278
Bacillota
TAG
Leu
>WENV181550198
OGIM01000055
322848
Bacillota
CTT
Lys
>WENV181550197
OGIM01000055
398854
Bacillota
CTC
Glu
>WENV181550184
OGIM01000038
291576
Bacillota
CCC
Gly
>WENV181550168
OGIM01000019
480324
Bacillota
TTG
Gln
>WENV181550447
OGIM01004150
400606
Bacillota
TTG
Gln
>WENV181550231
OGIM01000122
280444
Bacillota
GGT
Thr
>WENV181550153
OGIM01000005
280444
Bacillota
GGT
Thr
>WENV181550445
OGIM01004150
480918
Bacillota
>WENV181550203
OGIM01000060
321753
Bacillota
GCC
Gly
>WENV181550186
OGIM01000039
321753
Bacillota
GCC
Gly
>WENV181550330
OGIM01001003
179755
Bacillota
CCG
Arg
>WENV181550564
OGIM01014748
280547
Bacillota
GTC
Asp
>WENV181550527
OGIM01009938
289761
Bacillota
TTT
Lys
>WENV181550444
OGIM01004150
105208
Bacillota
GTA
Tyr
>WENV181550281
OGIM01000405
398832
Bacillota
TTC
Glu
>WENV181550441
OGIM01004110
178962
Bacillota
ACG
Arg
>WENV181550267
OGIM01000316
321248
Bacillota
TAC
Val
>WENV181550164
OGIM01000016
398833
Bacillota
TGT
Thr
>WENV181550230
OGIM01000122
175849
Bacillota
GTC
Asp
>WENV181550408
OGIM01003319
405393
Bacillota
GCC
Gly
>WENV181550254
OGIM01000258
56074
Bacillota
TGA
Ser
>WENV181550225
OGIM01000113
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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