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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
90 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181620202
OGME01006333
99852
Bacillota
GTA
Tyr
>WENV181620219
OGME01007151
99852
Bacillota
GTA
Tyr
>WENV181620236
OGME01008336
280500
Bacillota
TGC
Ala
>WENV181620240
OGME01008840
280500
Bacillota
TGC
Ala
>WENV181619863
OGME01000726
405363
Bacillota
GCA
Cys
>WENV181619966
OGME01001270
290391
Bacillota
TAC
Val
>WENV181620275
OGME01011861
280428
Bacillota
GAA
Phe
>WENV181619559
OGME01000082
179917
Bacillota
CAT
Met
>WENV181619722
OGME01000386
280492
Bacillota
CTT
Lys
>WENV181619494
OGME01000028
280492
Bacillota
CTT
Lys
>WENV181620120
OGME01003187
175842
Bacillota
CAC
Val
>WENV181619784
OGME01000512
175842
Bacillota
CAC
Val
>WENV181619716
OGME01000376
291629
Bacillota
CCA
Trp
>WENV181620340
OGME01020296
406553
Bacillota
TTG
Gln
>WENV181619620
OGME01000189
73664
Bacillota
CAG
Leu
>WENV181620251
OGME01009491
280447
Bacillota
GAC
Val
>WENV181620164
OGME01004814
280447
Bacillota
GAC
Val
>WENV181620156
OGME01004556
280447
Bacillota
GAC
Val
>WENV181619911
OGME01000985
280447
Bacillota
GAC
Val
>WENV181620252
OGME01009534
5692
Bacillota
GCT
Ser
>WENV181619753
OGME01000448
186123
Bacillota
GTC
Asp
>WENV181620397
OGME01046924
175825
Bacillota
GAT
Ile
>WENV181619556
OGME01000082
284723
Bacillota
TAC
Val
>WENV181620277
OGME01011936
73009
Bacillota
CAG
Leu
>WENV181620188
OGME01005872
73009
Bacillota
CAG
Leu
>WENV181619955
OGME01001204
291581
Bacillota
CGG
Pro
>WENV181620223
OGME01007491
175859
Bacillota
TCT
Arg
>WENV181620073
OGME01002433
175859
Bacillota
TCT
Arg
>WENV181620036
OGME01002062
175859
Bacillota
TCT
Arg
>WENV181620396
OGME01046924
280436
Bacillota
TGC
Ala
>WENV181620027
OGME01001996
175847
Bacillota
GTC
Asp
>WENV181620285
OGME01012455
21311
Bacillota
GCT
Ser
>WENV181619483
OGME01000025
179810
Bacillota
TCT
Arg
>WENV181619754
OGME01000448
291634
Bacillota
GAA
Phe
>WENV181619577
OGME01000112
294020
Bacillota
TAC
Val
>WENV181620122
OGME01003189
481760
Bacillota
TCC
Gly
>WENV181620199
OGME01006182
480322
Bacillota
CTG
Gln
>WENV181620162
OGME01004712
480322
Bacillota
CTG
Gln
>WENV181619954
OGME01001204
480322
Bacillota
CTG
Gln
>WENV181619823
OGME01000610
480322
Bacillota
CTG
Gln
>WENV181619598
OGME01000150
480322
Bacillota
CTG
Gln
>WENV181620041
OGME01002083
401685
Bacillota
TTG
Gln
>WENV181620321
OGME01016690
175868
Bacillota
GTT
Asn
>WENV181620092
OGME01002611
175868
Bacillota
GTT
Asn
>WENV181620076
OGME01002453
175868
Bacillota
GTT
Asn
>WENV181619909
OGME01000971
175868
Bacillota
GTT
Asn
>WENV181620075
OGME01002453
398854
Bacillota
CTC
Glu
>WENV181620147
OGME01004263
291576
Bacillota
CCC
Gly
>WENV181620131
OGME01003544
291576
Bacillota
CCC
Gly
>WENV181620330
OGME01018511
287280
Bacillota
TGT
Thr
>WENV181620071
OGME01002424
480324
Bacillota
TTG
Gln
>WENV181619984
OGME01001397
480324
Bacillota
TTG
Gln
>WENV181619953
OGME01001204
480324
Bacillota
TTG
Gln
>WENV181619619
OGME01000189
56079
Bacillota
AAG
Leu
>WENV181619517
OGME01000044
56079
Bacillota
AAG
Leu
>WENV181620356
OGME01022894
186051
Bacillota
GAT
Ile
>WENV181620333
OGME01019140
186051
Bacillota
GAT
Ile
>WENV181619519
OGME01000047
398857
Bacillota
TTC
Glu
>WENV181619930
OGME01001067
117745
Bacillota
GTA
Tyr
>WENV181619668
OGME01000279
117745
Bacillota
GTA
Tyr
>WENV181620117
OGME01003097
280444
Bacillota
GGT
Thr
>WENV181620080
OGME01002483
280444
Bacillota
GGT
Thr
>WENV181620079
OGME01002483
280444
Bacillota
GGT
Thr
>WENV181619949
OGME01001179
280444
Bacillota
GGT
Thr
>WENV181619946
OGME01001179
280444
Bacillota
GGT
Thr
>WENV181619981
OGME01001367
46643
Bacillota
TGA
Ser
>WENV181619963
OGME01001245
179755
Bacillota
CCG
Arg
>WENV181619952
OGME01001200
179755
Bacillota
CCG
Arg
>WENV181620250
OGME01009473
398832
Bacillota
TTC
Glu
>WENV181619739
OGME01000419
398832
Bacillota
TTC
Glu
>WENV181619904
OGME01000960
118669
Bacillota
GTA
Tyr
>WENV181619932
OGME01001067
280462
Bacillota
GAA
Phe
>WENV181620065
OGME01002401
398852
Bacillota
CTC
Glu
>WENV181619685
OGME01000314
398852
Bacillota
CTC
Glu
>WENV181619446
OGME01000002
398852
Bacillota
CTC
Glu
>WENV181619698
OGME01000326
289123
Bacillota
GGT
Thr
>WENV181619815
OGME01000588
175857
Bacillota
GTG
His
>WENV181619969
OGME01001270
285756
Bacillota
GCC
Gly
>WENV181620129
OGME01003445
398833
Bacillota
TGT
Thr
>WENV181620078
OGME01002483
175849
Bacillota
GTC
Asp
>WENV181619948
OGME01001179
175849
Bacillota
GTC
Asp
>WENV181619933
OGME01001067
280463
Bacillota
TTT
Lys
>WENV181619817
OGME01000588
280463
Bacillota
TTT
Lys
>WENV181619898
OGME01000912
405393
Bacillota
GCC
Gly
>WENV181620387
OGME01043357
56074
Bacillota
TGA
Ser
>WENV181620294
OGME01013553
280473
Bacillota
TGG
Pro
>WENV181620273
OGME01011553
280473
Bacillota
TGG
Pro
>WENV181620230
OGME01007680
280473
Bacillota
TGG
Pro
>WENV181620045
OGME01002084
280473
Bacillota
TGG
Pro
>WENV181619899
OGME01000920
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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