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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181654301
OGNZ01003118
343590
Bacillota
GCC
Gly
>WENV181654507
OGNZ01023191
280500
Bacillota
TGC
Ala
>WENV181654304
OGNZ01003222
349107
Bacillota
GCC
Gly
>WENV181654305
OGNZ01003222
405363
Bacillota
GCA
Cys
>WENV181654200
OGNZ01001159
280428
Bacillota
GAA
Phe
>WENV181653937
OGNZ01000037
284746
Bacillota
CTG
Gln
>WENV181654111
OGNZ01000486
280492
Bacillota
CTT
Lys
>WENV181654546
OGNZ01034712
280642
Bacillota
TTG
Gln
>WENV181654132
OGNZ01000609
175842
Bacillota
CAC
Val
>WENV181654144
OGNZ01000692
179176
Bacillota
ACG
Arg
>WENV181654159
OGNZ01000800
190476
Bacillota
CAT
Met
>WENV181654049
OGNZ01000244
73664
Bacillota
CAG
Leu
>WENV181654309
OGNZ01003278
280447
Bacillota
GAC
Val
>WENV181654115
OGNZ01000498
359682
Bacillota
TAC
Val
>WENV181654174
OGNZ01000914
73009
Bacillota
CAG
Leu
>WENV181654107
OGNZ01000476
73009
Bacillota
CAG
Leu
>WENV181654375
OGNZ01006599
291581
Bacillota
CGG
Pro
>WENV181654229
OGNZ01001623
175859
Bacillota
TCT
Arg
>WENV181654461
OGNZ01014955
280641
Bacillota
GTT
Asn
>WENV181654232
OGNZ01001632
175831
Bacillota
ACG
Arg
>WENV181654337
OGNZ01004914
353153
Bacillota
TGC
Ala
>WENV181654285
OGNZ01002347
284627
Bacillota
GAA
Phe
>WENV181654421
OGNZ01010865
195824
Bacillota
GAT
Ile
>WENV181653930
OGNZ01000035
293309
Bacillota
GTT
Asn
>WENV181654462
OGNZ01014955
478081
Bacillota
TGT
Thr
>WENV181654374
OGNZ01006599
480322
Bacillota
CTG
Gln
>WENV181654228
OGNZ01001619
175868
Bacillota
GTT
Asn
>WENV181654198
OGNZ01001144
284744
Bacillota
TTT
Lys
>WENV181654178
OGNZ01000950
398854
Bacillota
CTC
Glu
>WENV181654310
OGNZ01003418
291576
Bacillota
CCC
Gly
>WENV181654204
OGNZ01001196
480324
Bacillota
TTG
Gln
>WENV181654002
OGNZ01000136
497729
Bacillota
CCA
Trp
>WENV181653927
OGNZ01000032
175899
Bacillota
GTC
Asp
>WENV181654222
OGNZ01001516
56079
Bacillota
AAG
Leu
>WENV181654353
OGNZ01005518
323864
Bacillota
TGC
Ala
>WENV181654113
OGNZ01000498
179935
Bacillota
GTC
Asp
>WENV181654544
OGNZ01034055
117745
Bacillota
GTA
Tyr
>WENV181654295
OGNZ01002957
280444
Bacillota
GGT
Thr
>WENV181653962
OGNZ01000065
483485
Bacillota
CCC
Gly
>WENV181654106
OGNZ01000472
46643
Bacillota
TGA
Ser
>WENV181654361
OGNZ01006024
179755
Bacillota
CCG
Arg
>WENV181654199
OGNZ01001144
401111
Bacillota
TTC
Glu
>WENV181654412
OGNZ01009882
46835
Bacillota
TAA
Leu
>WENV181654114
OGNZ01000498
284742
Bacillota
GAA
Phe
>WENV181654160
OGNZ01000800
398832
Bacillota
TTC
Glu
>WENV181653972
OGNZ01000078
280462
Bacillota
GAA
Phe
>WENV181654157
OGNZ01000792
398852
Bacillota
CTC
Glu
>WENV181654112
OGNZ01000493
398852
Bacillota
CTC
Glu
>WENV181654102
OGNZ01000455
398852
Bacillota
CTC
Glu
>WENV181654058
OGNZ01000267
280483
Bacillota
GAA
Phe
>WENV181654062
OGNZ01000267
280483
Bacillota
GAA
Phe
>WENV181654063
OGNZ01000267
285756
Bacillota
GCC
Gly
>WENV181654059
OGNZ01000267
285756
Bacillota
GCC
Gly
>WENV181654300
OGNZ01003116
398833
Bacillota
TGT
Thr
>WENV181653973
OGNZ01000078
280463
Bacillota
TTT
Lys
>WENV181654407
OGNZ01009579
56074
Bacillota
TGA
Ser
>WENV181654143
OGNZ01000682
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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