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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
121 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181685488
OGOW01000299
510477
Bacillota
TCC
Gly
>WENV181686072
OGOW01004650
99852
Bacillota
GTA
Tyr
>WENV181686078
OGOW01004700
99852
Bacillota
GTA
Tyr
>WENV181686407
OGOW01013645
99852
Bacillota
GTA
Tyr
>WENV181686485
OGOW01016587
99852
Bacillota
GTA
Tyr
>WENV181686640
OGOW01028514
99852
Bacillota
GTA
Tyr
>WENV181685248
OGOW01000051
343590
Bacillota
GCC
Gly
>WENV181686392
OGOW01012884
343590
Bacillota
GCC
Gly
>WENV181685686
OGOW01000907
356775
Bacillota
TGT
Thr
>WENV181686421
OGOW01014076
280500
Bacillota
TGC
Ala
>WENV181686071
OGOW01004650
405363
Bacillota
GCA
Cys
>WENV181686427
OGOW01014214
184537
Bacillota
ACG
Arg
>WENV181685679
OGOW01000885
290391
Bacillota
TAC
Val
>WENV181686177
OGOW01006554
221826
Bacillota
ACG
Arg
>WENV181686455
OGOW01015397
408526
Bacillota
GCA
Cys
>WENV181685957
OGOW01003095
229015
Bacillota
GTG
His
>WENV181685779
OGOW01001441
179917
Bacillota
CAT
Met
>WENV181686872
OGOW01066787
296855
Bacillota
GGT
Thr
>WENV181686347
OGOW01010446
48505
Bacillota
TGA
Ser
>WENV181685969
OGOW01003154
175842
Bacillota
CAC
Val
>WENV181685567
OGOW01000504
291629
Bacillota
CCA
Trp
>WENV181686264
OGOW01008467
184497
Bacillota
GGG
Pro
>WENV181686166
OGOW01006299
184497
Bacillota
GGG
Pro
>WENV181686334
OGOW01010292
459011
Bacillota
TGT
Thr
>WENV181686257
OGOW01008212
179176
Bacillota
ACG
Arg
>WENV181685653
OGOW01000789
179176
Bacillota
ACG
Arg
>WENV181685730
OGOW01001097
20932
Bacillota
GCT
Ser
>WENV181686034
OGOW01004115
190476
Bacillota
CAT
Met
>WENV181686542
OGOW01020988
482593
Bacillota
CCC
Gly
>WENV181686527
OGOW01019980
20942
Bacillota
GGA
Ser
>WENV181685587
OGOW01000594
73664
Bacillota
CAG
Leu
>WENV181686559
OGOW01022409
280447
Bacillota
GAC
Val
>WENV181686379
OGOW01011859
280447
Bacillota
GAC
Val
>WENV181686329
OGOW01010292
480360
Bacillota
GCA
Cys
>WENV181686208
OGOW01006952
312274
Bacillota
GGC
Ala
>WENV181685708
OGOW01000980
186123
Bacillota
GTC
Asp
>WENV181686798
OGOW01051336
175825
Bacillota
GAT
Ile
>WENV181685449
OGOW01000240
284723
Bacillota
TAC
Val
>WENV181685907
OGOW01002587
284723
Bacillota
TAC
Val
>WENV181686359
OGOW01011142
284723
Bacillota
TAC
Val
>WENV181686354
OGOW01010895
73009
Bacillota
CAG
Leu
>WENV181686107
OGOW01005152
73009
Bacillota
CAG
Leu
>WENV181686607
OGOW01025960
189473
Bacillota
GAT
Ile
>WENV181686065
OGOW01004549
407726
Bacillota
CTG
Gln
>WENV181686483
OGOW01016336
291581
Bacillota
CGG
Pro
>WENV181686411
OGOW01013755
291581
Bacillota
CGG
Pro
>WENV181686235
OGOW01007744
291581
Bacillota
CGG
Pro
>WENV181686063
OGOW01004545
175859
Bacillota
TCT
Arg
>WENV181686060
OGOW01004448
175859
Bacillota
TCT
Arg
>WENV181686797
OGOW01051336
280436
Bacillota
TGC
Ala
>WENV181686333
OGOW01010292
280641
Bacillota
GTT
Asn
>WENV181686473
OGOW01015837
175831
Bacillota
ACG
Arg
>WENV181685897
OGOW01002488
175831
Bacillota
ACG
Arg
>WENV181686873
OGOW01066787
184495
Bacillota
CAT
Met
>WENV181686869
OGOW01066787
332181
Bacillota
TGT
Thr
>WENV181685429
OGOW01000209
332181
Bacillota
TGT
Thr
>WENV181685956
OGOW01003095
179810
Bacillota
TCT
Arg
>WENV181685444
OGOW01000231
284627
Bacillota
GAA
Phe
>WENV181685709
OGOW01000980
291634
Bacillota
GAA
Phe
>WENV181685552
OGOW01000463
346451
Bacillota
TTT
Lys
>WENV181685819
OGOW01001769
404091
Bacillota
TTG
Gln
>WENV181685589
OGOW01000601
27216
Bacillota
GCT
Ser
>WENV181686482
OGOW01016336
480322
Bacillota
CTG
Gln
>WENV181686410
OGOW01013755
480322
Bacillota
CTG
Gln
>WENV181686234
OGOW01007744
480322
Bacillota
CTG
Gln
>WENV181685984
OGOW01003415
480322
Bacillota
CTG
Gln
>WENV181685805
OGOW01001673
480322
Bacillota
CTG
Gln
>WENV181686272
OGOW01008719
187364
Bacillota
CAT
Met
>WENV181686475
OGOW01015872
175868
Bacillota
GTT
Asn
>WENV181686368
OGOW01011266
175868
Bacillota
GTT
Asn
>WENV181686280
OGOW01008830
175868
Bacillota
GTT
Asn
>WENV181686192
OGOW01006732
175868
Bacillota
GTT
Asn
>WENV181685818
OGOW01001769
289716
Bacillota
GTG
His
>WENV181686474
OGOW01015872
398854
Bacillota
CTC
Glu
>WENV181686367
OGOW01011266
398854
Bacillota
CTC
Glu
>WENV181686191
OGOW01006732
398854
Bacillota
CTC
Glu
>WENV181686321
OGOW01009954
291576
Bacillota
CCC
Gly
>WENV181686196
OGOW01006761
291576
Bacillota
CCC
Gly
>WENV181686338
OGOW01010336
480324
Bacillota
TTG
Gln
>WENV181686118
OGOW01005357
480324
Bacillota
TTG
Gln
>WENV181686110
OGOW01005165
480324
Bacillota
TTG
Gln
>WENV181685893
OGOW01002406
480324
Bacillota
TTG
Gln
>WENV181685904
OGOW01002552
508151
Bacillota
GGT
Thr
>WENV181685609
OGOW01000700
497729
Bacillota
CCA
Trp
>WENV181685678
OGOW01000885
180688
Bacillota
GTC
Asp
>WENV181686273
OGOW01008726
73638
Bacillota
AAG
Leu
>WENV181686193
OGOW01006733
323864
Bacillota
TGC
Ala
>WENV181686879
OGOW01068042
175911
Bacillota
GTC
Asp
>WENV181685821
OGOW01001769
432453
Bacillota
TTC
Glu
>WENV181686657
OGOW01030785
480337
Bacillota
TCC
Gly
>WENV181686328
OGOW01010292
176019
Bacillota
GTG
His
>WENV181686885
OGOW01068958
186051
Bacillota
GAT
Ile
>WENV181686517
OGOW01019469
398857
Bacillota
TTC
Glu
>WENV181686436
OGOW01014642
280444
Bacillota
GGT
Thr
>WENV181686289
OGOW01008969
280444
Bacillota
GGT
Thr
>WENV181685912
OGOW01002628
280444
Bacillota
GGT
Thr
>WENV181685645
OGOW01000761
483485
Bacillota
CCC
Gly
>WENV181686555
OGOW01021940
179755
Bacillota
CCG
Arg
>WENV181685929
OGOW01002859
179755
Bacillota
CCG
Arg
>WENV181685707
OGOW01000964
445407
Bacillota
GCC
Gly
>WENV181685820
OGOW01001769
289761
Bacillota
TTT
Lys
>WENV181686035
OGOW01004115
398832
Bacillota
TTC
Glu
>WENV181685995
OGOW01003504
398832
Bacillota
TTC
Glu
>WENV181685698
OGOW01000936
118669
Bacillota
GTA
Tyr
>WENV181685822
OGOW01001769
289715
Bacillota
TAC
Val
>WENV181686325
OGOW01010062
280476
Bacillota
TTT
Lys
>WENV181686018
OGOW01003782
20943
Bacillota
CGA
Ser
>WENV181685383
OGOW01000157
398852
Bacillota
CTC
Glu
>WENV181685382
OGOW01000157
398852
Bacillota
CTC
Glu
>WENV181686787
OGOW01049089
201856
Bacillota
GAT
Ile
>WENV181685432
OGOW01000209
289123
Bacillota
GGT
Thr
>WENV181686656
OGOW01030785
208539
Bacillota
TGG
Pro
>WENV181685260
OGOW01000057
280483
Bacillota
GAA
Phe
>WENV181685261
OGOW01000057
285756
Bacillota
GCC
Gly
>WENV181686405
OGOW01013516
398833
Bacillota
TGT
Thr
>WENV181685676
OGOW01000885
285556
Bacillota
TGT
Thr
>WENV181686435
OGOW01014642
175849
Bacillota
GTC
Asp
>WENV181686775
OGOW01047139
318172
Bacillota
CCA
Trp
>WENV181685174
OGOW01000012
405393
Bacillota
GCC
Gly
>WENV181686504
OGOW01017610
280473
Bacillota
TGG
Pro
>WENV181686153
OGOW01006013
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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