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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181700620
OGPG01038116
176499
Actinomycetota
CAT
Met
>WENV181700710
OGPG01056130
280498
Actinomycetota
GTT
Asn
>WENV181700749
OGPG01065582
140768
Actinomycetota
TAG
Leu
>WENV181700505
OGPG01021044
398843
Actinomycetota
GTT
Asn
>WENV181700737
OGPG01063123
176638
Actinomycetota
GGG
Pro
>WENV181700168
OGPG01004628
291585
Actinomycetota
GCC
Gly
>WENV181700610
OGPG01035970
280523
Actinomycetota
GGC
Ala
>WENV181700738
OGPG01063366
175841
Actinomycetota
TAT
Ile
>WENV181700676
OGPG01047412
280536
Actinomycetota
CTT
Lys
>WENV181700647
OGPG01043516
280450
Actinomycetota
TTT
Lys
>WENV181700467
OGPG01018234
480329
Actinomycetota
CCC
Gly
>WENV181700310
OGPG01008570
483206
Actinomycetota
CTG
Gln
>WENV181700766
OGPG01072551
20209
Actinomycetota
GAG
Leu
>WENV181700735
OGPG01062361
222475
Actinomycetota
CTT
Lys
>WENV181700624
OGPG01038733
280489
Actinomycetota
CTC
Glu
>WENV181700701
OGPG01054204
280499
Actinomycetota
CCT
Arg
>WENV181700776
OGPG01077599
297606
Actinomycetota
CCT
Arg
>WENV181700625
OGPG01038733
398853
Actinomycetota
CTG
Gln
>WENV181700777
OGPG01078018
175843
Actinomycetota
CAA
Leu
>WENV181700562
OGPG01028940
46642
Actinomycetota
CGA
Ser
>WENV181700652
OGPG01044569
104211
Actinomycetota
CAG
Leu
>WENV181700619
OGPG01038116
117903
Actinomycetota
GTA
Tyr
>WENV181700709
OGPG01055308
147796
Actinomycetota
TAA
Leu
>WENV181700748
OGPG01065582
280470
Actinomycetota
CGT
Thr
>WENV181700657
OGPG01045053
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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