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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
154 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181793577
OGRR01005220
99852
Bacillota
GTA
Tyr
>WENV181793271
OGRR01001157
416763
Bacillota
CTC
Glu
>WENV181793949
OGRR01025367
212982
Bacillota
ACG
Arg
>WENV181792990
OGRR01000225
343590
Bacillota
GCC
Gly
>WENV181792991
OGRR01000225
343590
Bacillota
GCC
Gly
>WENV181792992
OGRR01000225
343590
Bacillota
GCC
Gly
>WENV181792993
OGRR01000225
343590
Bacillota
GCC
Gly
>WENV181793171
OGRR01000694
343590
Bacillota
GCC
Gly
>WENV181793172
OGRR01000694
343590
Bacillota
GCC
Gly
>WENV181794004
OGRR01036573
356775
Bacillota
TGT
Thr
>WENV181793990
OGRR01033827
280500
Bacillota
TGC
Ala
>WENV181793380
OGRR01001889
405363
Bacillota
GCA
Cys
>WENV181793451
OGRR01002801
184537
Bacillota
ACG
Arg
>WENV181793887
OGRR01019526
444314
Bacillota
GTT
Asn
>WENV181793647
OGRR01006806
280428
Bacillota
GAA
Phe
>WENV181794043
OGRR01046251
141454
Bacillota
TAG
Leu
>WENV181793954
OGRR01025367
296855
Bacillota
GGT
Thr
>WENV181793868
OGRR01017458
48505
Bacillota
TGA
Ser
>WENV181793129
OGRR01000554
302145
Bacillota
GAA
Phe
>WENV181793833
OGRR01014945
280466
Bacillota
TAC
Val
>WENV181793638
OGRR01006622
280492
Bacillota
CTT
Lys
>WENV181794041
OGRR01046251
418726
Bacillota
TGT
Thr
>WENV181793588
OGRR01005312
175842
Bacillota
CAC
Val
>WENV181793336
OGRR01001586
175842
Bacillota
CAC
Val
>WENV181793948
OGRR01025367
46774
Bacillota
TAA
Leu
>WENV181794026
OGRR01042232
236579
Bacillota
GAT
Ile
>WENV181792924
OGRR01000139
348419
Bacillota
GTT
Asn
>WENV181793691
OGRR01007978
184497
Bacillota
GGG
Pro
>WENV181793317
OGRR01001453
184497
Bacillota
GGG
Pro
>WENV181793014
OGRR01000262
184497
Bacillota
GGG
Pro
>WENV181792976
OGRR01000203
184497
Bacillota
GGG
Pro
>WENV181793332
OGRR01001539
179176
Bacillota
ACG
Arg
>WENV181793263
OGRR01001114
179176
Bacillota
ACG
Arg
>WENV181793371
OGRR01001814
20932
Bacillota
GCT
Ser
>WENV181793210
OGRR01000897
352588
Bacillota
CAT
Met
>WENV181793914
OGRR01022081
291553
Bacillota
GAA
Phe
>WENV181794025
OGRR01042232
295166
Bacillota
TGC
Ala
>WENV181793497
OGRR01003510
190476
Bacillota
CAT
Met
>WENV181793411
OGRR01002246
190476
Bacillota
CAT
Met
>WENV181793622
OGRR01006071
482593
Bacillota
CCC
Gly
>WENV181793718
OGRR01009005
339995
Bacillota
TGC
Ala
>WENV181792769
OGRR01000008
82124
Bacillota
TAA
Leu
>WENV181793474
OGRR01003083
20942
Bacillota
GGA
Ser
>WENV181793832
OGRR01014945
399153
Bacillota
TTC
Glu
>WENV181794044
OGRR01046251
398916
Bacillota
>WENV181793470
OGRR01003035
73664
Bacillota
CAG
Leu
>WENV181793011
OGRR01000256
73664
Bacillota
CAG
Leu
>WENV181792960
OGRR01000182
73664
Bacillota
CAG
Leu
>WENV181793744
OGRR01010889
280447
Bacillota
GAC
Val
>WENV181793540
OGRR01004631
280447
Bacillota
GAC
Val
>WENV181793518
OGRR01004150
280447
Bacillota
GAC
Val
>WENV181793446
OGRR01002755
280447
Bacillota
GAC
Val
>WENV181793798
OGRR01013485
73009
Bacillota
CAG
Leu
>WENV181793702
OGRR01008320
73009
Bacillota
CAG
Leu
>WENV181793696
OGRR01008102
73009
Bacillota
CAG
Leu
>WENV181793449
OGRR01002793
481217
Bacillota
GCA
Cys
>WENV181793982
OGRR01030631
399266
Bacillota
>WENV181793983
OGRR01030631
399266
Bacillota
>WENV181794019
OGRR01040264
280646
Bacillota
TGC
Ala
>WENV181793026
OGRR01000283
407726
Bacillota
CTG
Gln
>WENV181793590
OGRR01005350
291581
Bacillota
CGG
Pro
>WENV181793330
OGRR01001532
175859
Bacillota
TCT
Arg
>WENV181793597
OGRR01005513
175859
Bacillota
TCT
Arg
>WENV181793504
OGRR01003734
175859
Bacillota
TCT
Arg
>WENV181793400
OGRR01002114
175859
Bacillota
TCT
Arg
>WENV181794040
OGRR01046251
280641
Bacillota
GTT
Asn
>WENV181793090
OGRR01000429
21311
Bacillota
GCT
Ser
>WENV181793303
OGRR01001362
175831
Bacillota
ACG
Arg
>WENV181793955
OGRR01025367
184495
Bacillota
CAT
Met
>WENV181793065
OGRR01000386
284627
Bacillota
GAA
Phe
>WENV181792968
OGRR01000193
284627
Bacillota
GAA
Phe
>WENV181793989
OGRR01033827
175916
Bacillota
GAT
Ile
>WENV181793657
OGRR01007326
480322
Bacillota
CTG
Gln
>WENV181793656
OGRR01007291
480322
Bacillota
CTG
Gln
>WENV181793469
OGRR01003007
480322
Bacillota
CTG
Gln
>WENV181792774
OGRR01000012
187364
Bacillota
CAT
Met
>WENV181793770
OGRR01012426
141533
Bacillota
CAA
Leu
>WENV181793711
OGRR01008689
175868
Bacillota
GTT
Asn
>WENV181793584
OGRR01005282
175868
Bacillota
GTT
Asn
>WENV181793493
OGRR01003432
175868
Bacillota
GTT
Asn
>WENV181793352
OGRR01001635
175868
Bacillota
GTT
Asn
>WENV181793261
OGRR01001109
175868
Bacillota
GTT
Asn
>WENV181793905
OGRR01021408
289716
Bacillota
GTG
His
>WENV181793950
OGRR01025367
208754
Bacillota
TGG
Pro
>WENV181794057
OGRR01049976
120584
Bacillota
GTA
Tyr
>WENV181794054
OGRR01049976
120584
Bacillota
GTA
Tyr
>WENV181794052
OGRR01049976
120584
Bacillota
GTA
Tyr
>WENV181793583
OGRR01005282
398854
Bacillota
CTC
Glu
>WENV181793260
OGRR01001109
398854
Bacillota
CTC
Glu
>WENV181793630
OGRR01006243
291576
Bacillota
CCC
Gly
>WENV181793443
OGRR01002614
291576
Bacillota
CCC
Gly
>WENV181793789
OGRR01013161
480324
Bacillota
TTG
Gln
>WENV181793710
OGRR01008685
480324
Bacillota
TTG
Gln
>WENV181793533
OGRR01004403
480324
Bacillota
TTG
Gln
>WENV181793379
OGRR01001889
480324
Bacillota
TTG
Gln
>WENV181793743
OGRR01010834
497729
Bacillota
CCA
Trp
>WENV181793741
OGRR01010830
497729
Bacillota
CCA
Trp
>WENV181793374
OGRR01001840
497729
Bacillota
CCA
Trp
>WENV181792895
OGRR01000123
73638
Bacillota
AAG
Leu
>WENV181793849
OGRR01016177
323864
Bacillota
TGC
Ala
>WENV181793817
OGRR01014480
432453
Bacillota
TTC
Glu
>WENV181793204
OGRR01000855
480337
Bacillota
TCC
Gly
>WENV181793615
OGRR01005914
280444
Bacillota
GGT
Thr
>WENV181793582
OGRR01005265
280444
Bacillota
GGT
Thr
>WENV181793890
OGRR01020077
119459
Bacillota
TAG
Leu
>WENV181792824
OGRR01000057
483485
Bacillota
CCC
Gly
>WENV181793804
OGRR01013809
354380
Bacillota
TTT
Lys
>WENV181793793
OGRR01013310
179755
Bacillota
CCG
Arg
>WENV181793692
OGRR01007985
179755
Bacillota
CCG
Arg
>WENV181793543
OGRR01004651
179755
Bacillota
CCG
Arg
>WENV181793465
OGRR01002936
179755
Bacillota
CCG
Arg
>WENV181793913
OGRR01022081
280547
Bacillota
GTC
Asp
>WENV181793747
OGRR01011050
58120
Bacillota
AAG
Leu
>WENV181792892
OGRR01000122
58120
Bacillota
AAG
Leu
>WENV181792891
OGRR01000122
58120
Bacillota
AAG
Leu
>WENV181793700
OGRR01008256
445407
Bacillota
GCC
Gly
>WENV181794016
OGRR01039956
344985
Bacillota
GAA
Phe
>WENV181793931
OGRR01023648
46835
Bacillota
TAA
Leu
>WENV181793286
OGRR01001245
46835
Bacillota
TAA
Leu
>WENV181793059
OGRR01000374
46835
Bacillota
TAA
Leu
>WENV181793498
OGRR01003510
398832
Bacillota
TTC
Glu
>WENV181793412
OGRR01002246
398832
Bacillota
TTC
Glu
>WENV181793544
OGRR01004668
25955
Bacillota
GCT
Ser
>WENV181793803
OGRR01013809
203851
Bacillota
TCT
Arg
>WENV181792997
OGRR01000233
118669
Bacillota
GTA
Tyr
>WENV181792970
OGRR01000193
118669
Bacillota
GTA
Tyr
>WENV181792768
OGRR01000008
118669
Bacillota
GTA
Tyr
>WENV181794032
OGRR01043447
283367
Bacillota
GCC
Gly
>WENV181793818
OGRR01014480
289715
Bacillota
TAC
Val
>WENV181793418
OGRR01002273
280476
Bacillota
TTT
Lys
>WENV181793233
OGRR01001055
280476
Bacillota
TTT
Lys
>WENV181793205
OGRR01000855
20943
Bacillota
CGA
Ser
>WENV181793521
OGRR01004272
280462
Bacillota
GAA
Phe
>WENV181793587
OGRR01005302
398852
Bacillota
CTC
Glu
>WENV181793344
OGRR01001617
398852
Bacillota
CTC
Glu
>WENV181792854
OGRR01000088
398852
Bacillota
CTC
Glu
>WENV181792767
OGRR01000006
398852
Bacillota
CTC
Glu
>WENV181792766
OGRR01000006
398852
Bacillota
CTC
Glu
>WENV181793345
OGRR01001618
118359
Bacillota
GTA
Tyr
>WENV181793203
OGRR01000855
208539
Bacillota
TGG
Pro
>WENV181793482
OGRR01003311
321248
Bacillota
TAC
Val
>WENV181793348
OGRR01001628
298260
Bacillota
GTT
Asn
>WENV181792764
OGRR01000004
406186
Bacillota
CTC
Glu
>WENV181792763
OGRR01000004
406186
Bacillota
CTC
Glu
>WENV181792762
OGRR01000004
406186
Bacillota
CTC
Glu
>WENV181793751
OGRR01011367
398833
Bacillota
TGT
Thr
>WENV181793576
OGRR01005220
398833
Bacillota
TGT
Thr
>WENV181794066
OGRR01058831
328987
Bacillota
TGG
Pro
>WENV181793415
OGRR01002273
179166
Bacillota
TCT
Arg
>WENV181793843
OGRR01015691
56074
Bacillota
TGA
Ser
>WENV181793784
OGRR01013032
56074
Bacillota
TGA
Ser
>WENV181793755
OGRR01011682
56074
Bacillota
TGA
Ser
>WENV181793578
OGRR01005226
280473
Bacillota
TGG
Pro
>WENV181793481
OGRR01003301
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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