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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181815648
OGTK01005877
200563
Bacillota
TGG
Pro
>WENV181815302
OGTK01000001
184537
Bacillota
ACG
Arg
>WENV181815312
OGTK01000002
408526
Bacillota
GCA
Cys
>WENV181815507
OGTK01000164
296855
Bacillota
GGT
Thr
>WENV181815340
OGTK01000013
48505
Bacillota
TGA
Ser
>WENV181815305
OGTK01000001
289717
Bacillota
CTT
Lys
>WENV181815580
OGTK01001568
459011
Bacillota
TGT
Thr
>WENV181815601
OGTK01002012
459011
Bacillota
TGT
Thr
>WENV181815431
OGTK01000055
20932
Bacillota
GCT
Ser
>WENV181815551
OGTK01000662
291553
Bacillota
GAA
Phe
>WENV181815310
OGTK01000002
291553
Bacillota
GAA
Phe
>WENV181815594
OGTK01001605
13228
Bacillota
GGA
Ser
>WENV181815308
OGTK01000002
482593
Bacillota
CCC
Gly
>WENV181815584
OGTK01001568
176014
Bacillota
TCT
Arg
>WENV181815391
OGTK01000029
20942
Bacillota
GGA
Ser
>WENV181815583
OGTK01001568
398916
Bacillota
>WENV181815593
OGTK01001568
480360
Bacillota
GCA
Cys
>WENV181815651
OGTK01005877
480360
Bacillota
GCA
Cys
>WENV181815635
OGTK01004084
176087
Bacillota
ACG
Arg
>WENV181815624
OGTK01002722
371336
Bacillota
GAA
Phe
>WENV181815508
OGTK01000164
184495
Bacillota
CAT
Met
>WENV181815307
OGTK01000001
141202
Bacillota
CAA
Leu
>WENV181815504
OGTK01000164
332181
Bacillota
TGT
Thr
>WENV181815579
OGTK01001568
195133
Bacillota
GTC
Asp
>WENV181815581
OGTK01001568
124757
Bacillota
GTA
Tyr
>WENV181815636
OGTK01004084
280640
Bacillota
TAC
Val
>WENV181815388
OGTK01000027
404091
Bacillota
TTG
Gln
>WENV181815387
OGTK01000027
289716
Bacillota
GTG
His
>WENV181815500
OGTK01000161
508151
Bacillota
GGT
Thr
>WENV181815502
OGTK01000164
432453
Bacillota
TTC
Glu
>WENV181815385
OGTK01000027
432453
Bacillota
TTC
Glu
>WENV181815381
OGTK01000027
432453
Bacillota
TTC
Glu
>WENV181815434
OGTK01000056
480337
Bacillota
TCC
Gly
>WENV181815582
OGTK01001568
144655
Bacillota
TAG
Leu
>WENV181815591
OGTK01001568
176019
Bacillota
GTG
His
>WENV181815649
OGTK01005877
176019
Bacillota
GTG
His
>WENV181815303
OGTK01000001
119459
Bacillota
TAG
Leu
>WENV181815587
OGTK01001568
52889
Bacillota
TGA
Ser
>WENV181815550
OGTK01000662
280547
Bacillota
GTC
Asp
>WENV181815309
OGTK01000002
280547
Bacillota
GTC
Asp
>WENV181815383
OGTK01000027
445407
Bacillota
GCC
Gly
>WENV181815378
OGTK01000027
445407
Bacillota
GCC
Gly
>WENV181815311
OGTK01000002
445407
Bacillota
GCC
Gly
>WENV181815389
OGTK01000027
289761
Bacillota
TTT
Lys
>WENV181815380
OGTK01000027
289761
Bacillota
TTT
Lys
>WENV181815382
OGTK01000027
289715
Bacillota
TAC
Val
>WENV181815386
OGTK01000027
289715
Bacillota
TAC
Val
>WENV181815503
OGTK01000164
289715
Bacillota
TAC
Val
>WENV181815432
OGTK01000056
20943
Bacillota
CGA
Ser
>WENV181815433
OGTK01000056
208539
Bacillota
TGG
Pro
>WENV181815435
OGTK01000056
184539
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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