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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181934313
OGYT01005154
178658
Actinomycetota
CAA
Leu
>WENV181934115
OGYT01001512
176499
Actinomycetota
CAT
Met
>WENV181934521
OGYT01014131
175883
Actinomycetota
GAT
Ile
>WENV181934332
OGYT01005733
280498
Actinomycetota
GTT
Asn
>WENV181934323
OGYT01005607
280503
Actinomycetota
CCT
Arg
>WENV181934644
OGYT01029092
295964
Actinomycetota
GTT
Asn
>WENV181934598
OGYT01022142
56083
Actinomycetota
CGA
Ser
>WENV181934256
OGYT01003682
140768
Actinomycetota
TAG
Leu
>WENV181934471
OGYT01011410
176075
Actinomycetota
TCT
Arg
>WENV181934499
OGYT01012702
175848
Actinomycetota
TGG
Pro
>WENV181934356
OGYT01006405
59689
Actinomycetota
GGA
Ser
>WENV181934386
OGYT01007215
175837
Actinomycetota
ACG
Arg
>WENV181934385
OGYT01007215
175837
Actinomycetota
ACG
Arg
>WENV181934330
OGYT01005697
186055
Actinomycetota
ACG
Arg
>WENV181934375
OGYT01007061
29393
Actinomycetota
GCT
Ser
>WENV181934569
OGYT01019702
280702
Actinomycetota
GGC
Ala
>WENV181934541
OGYT01016134
176077
Actinomycetota
CAT
Met
>WENV181934374
OGYT01007056
176638
Actinomycetota
GGG
Pro
>WENV181934492
OGYT01012546
481719
Actinomycetota
GCA
Cys
>WENV181934283
OGYT01004457
176723
Actinomycetota
TCT
Arg
>WENV181934494
OGYT01012546
291585
Actinomycetota
GCC
Gly
>WENV181934493
OGYT01012546
291585
Actinomycetota
GCC
Gly
>WENV181934194
OGYT01002354
281239
Actinomycetota
TTT
Lys
>WENV181934468
OGYT01010911
150272
Actinomycetota
TAA
Leu
>WENV181934249
OGYT01003507
117777
Actinomycetota
>WENV181934509
OGYT01013186
280523
Actinomycetota
GGC
Ala
>WENV181934451
OGYT01010052
280523
Actinomycetota
GGC
Ala
>WENV181934097
OGYT01001422
280523
Actinomycetota
GGC
Ala
>WENV181934310
OGYT01005114
175841
Actinomycetota
TAT
Ile
>WENV181934359
OGYT01006477
280496
Actinomycetota
CGT
Thr
>WENV181934099
OGYT01001426
20205
Actinomycetota
GCT
Ser
>WENV181934296
OGYT01004740
20205
Actinomycetota
GCT
Ser
>WENV181934475
OGYT01011713
175926
Actinomycetota
CAT
Met
>WENV181934240
OGYT01003253
280450
Actinomycetota
TTT
Lys
>WENV181934665
OGYT01031999
323758
Actinomycetota
CGT
Thr
>WENV181934563
OGYT01018477
56166
Actinomycetota
TGA
Ser
>WENV181934533
OGYT01015378
358727
Actinomycetota
CCG
Arg
>WENV181934357
OGYT01006422
358727
Actinomycetota
CCG
Arg
>WENV181934088
OGYT01001344
480329
Actinomycetota
CCC
Gly
>WENV181934452
OGYT01010059
483206
Actinomycetota
CTG
Gln
>WENV181934270
OGYT01004059
175882
Actinomycetota
TGG
Pro
>WENV181934659
OGYT01030912
20209
Actinomycetota
GAG
Leu
>WENV181934401
OGYT01008010
222475
Actinomycetota
CTT
Lys
>WENV181934148
OGYT01001799
480319
Actinomycetota
TTG
Gln
>WENV181934337
OGYT01005912
280499
Actinomycetota
CCT
Arg
>WENV181934695
OGYT01038854
176642
Actinomycetota
CAA
Leu
>WENV181934370
OGYT01006737
175843
Actinomycetota
CAA
Leu
>WENV181934340
OGYT01005979
56075
Actinomycetota
TGA
Ser
>WENV181934412
OGYT01008506
46642
Actinomycetota
CGA
Ser
>WENV181934149
OGYT01001825
104211
Actinomycetota
CAG
Leu
>WENV181934114
OGYT01001512
117903
Actinomycetota
GTA
Tyr
>WENV181934516
OGYT01013908
179238
Actinomycetota
GAT
Ile
>WENV181934450
OGYT01010033
147796
Actinomycetota
TAA
Leu
>WENV181934255
OGYT01003682
280470
Actinomycetota
CGT
Thr
>WENV181934436
OGYT01009224
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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