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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181972159
OGZZ01014917
280500
Bacillota
TGC
Ala
>WENV181972013
OGZZ01007463
405363
Bacillota
GCA
Cys
>WENV181972031
OGZZ01008077
289472
Bacillota
TTC
Glu
>WENV181971826
OGZZ01003288
280428
Bacillota
GAA
Phe
>WENV181971533
OGZZ01000714
291579
Bacillota
GAA
Phe
>WENV181971790
OGZZ01002720
291579
Bacillota
GAA
Phe
>WENV181972020
OGZZ01007792
280466
Bacillota
TAC
Val
>WENV181971636
OGZZ01001338
280492
Bacillota
CTT
Lys
>WENV181971282
OGZZ01000009
280492
Bacillota
CTT
Lys
>WENV181971837
OGZZ01003447
175842
Bacillota
CAC
Val
>WENV181971787
OGZZ01002706
184497
Bacillota
GGG
Pro
>WENV181971821
OGZZ01003181
179176
Bacillota
ACG
Arg
>WENV181971573
OGZZ01000921
295166
Bacillota
TGC
Ala
>WENV181971795
OGZZ01002756
190476
Bacillota
CAT
Met
>WENV181971736
OGZZ01002227
190476
Bacillota
CAT
Met
>WENV181971666
OGZZ01001642
190476
Bacillota
CAT
Met
>WENV181972019
OGZZ01007792
399153
Bacillota
TTC
Glu
>WENV181971799
OGZZ01002842
73664
Bacillota
CAG
Leu
>WENV181971327
OGZZ01000093
73664
Bacillota
CAG
Leu
>WENV181972062
OGZZ01009393
280447
Bacillota
GAC
Val
>WENV181972022
OGZZ01007975
5692
Bacillota
GCT
Ser
>WENV181971858
OGZZ01003845
5692
Bacillota
GCT
Ser
>WENV181971297
OGZZ01000036
186123
Bacillota
GTC
Asp
>WENV181971732
OGZZ01002161
73009
Bacillota
CAG
Leu
>WENV181972156
OGZZ01014507
481217
Bacillota
GCA
Cys
>WENV181971649
OGZZ01001494
291581
Bacillota
CGG
Pro
>WENV181972066
OGZZ01009606
175859
Bacillota
TCT
Arg
>WENV181971734
OGZZ01002167
398835
Bacillota
GCC
Gly
>WENV181971579
OGZZ01000977
21311
Bacillota
GCT
Ser
>WENV181971823
OGZZ01003227
175831
Bacillota
ACG
Arg
>WENV181972304
OGZZ01035838
47166
Bacillota
CGA
Ser
>WENV181971669
OGZZ01001673
284627
Bacillota
GAA
Phe
>WENV181971478
OGZZ01000461
284627
Bacillota
GAA
Phe
>WENV181971298
OGZZ01000036
291634
Bacillota
GAA
Phe
>WENV181971565
OGZZ01000867
484885
Bacillota
TCC
Gly
>WENV181972149
OGZZ01014118
480322
Bacillota
CTG
Gln
>WENV181971841
OGZZ01003568
480322
Bacillota
CTG
Gln
>WENV181971648
OGZZ01001494
480322
Bacillota
CTG
Gln
>WENV181971317
OGZZ01000059
480322
Bacillota
CTG
Gln
>WENV181971817
OGZZ01003152
175868
Bacillota
GTT
Asn
>WENV181972357
OGZZ01049444
184455
Bacillota
GTC
Asp
>WENV181972280
OGZZ01031575
322848
Bacillota
CTT
Lys
>WENV181971816
OGZZ01003152
398854
Bacillota
CTC
Glu
>WENV181972199
OGZZ01018191
291576
Bacillota
CCC
Gly
>WENV181971744
OGZZ01002311
291576
Bacillota
CCC
Gly
>WENV181971694
OGZZ01001845
291576
Bacillota
CCC
Gly
>WENV181972070
OGZZ01009893
480324
Bacillota
TTG
Gln
>WENV181971595
OGZZ01001059
480324
Bacillota
TTG
Gln
>WENV181971603
OGZZ01001145
497729
Bacillota
CCA
Trp
>WENV181971508
OGZZ01000582
497729
Bacillota
CCA
Trp
>WENV181971326
OGZZ01000093
56079
Bacillota
AAG
Leu
>WENV181972029
OGZZ01008077
403952
Bacillota
CTG
Gln
>WENV181972220
OGZZ01020252
398857
Bacillota
TTC
Glu
>WENV181971307
OGZZ01000051
117745
Bacillota
GTA
Tyr
>WENV181971932
OGZZ01005258
280444
Bacillota
GGT
Thr
>WENV181971919
OGZZ01004825
280444
Bacillota
GGT
Thr
>WENV181971358
OGZZ01000141
46643
Bacillota
TGA
Ser
>WENV181972030
OGZZ01008077
289745
Bacillota
TTT
Lys
>WENV181971987
OGZZ01006631
179755
Bacillota
CCG
Arg
>WENV181971828
OGZZ01003309
179755
Bacillota
CCG
Arg
>WENV181971681
OGZZ01001763
58120
Bacillota
AAG
Leu
>WENV181972012
OGZZ01007440
58120
Bacillota
AAG
Leu
>WENV181972371
OGZZ01062405
289154
Bacillota
CTT
Lys
>WENV181971622
OGZZ01001293
46835
Bacillota
TAA
Leu
>WENV181971445
OGZZ01000370
46835
Bacillota
TAA
Leu
>WENV181971796
OGZZ01002756
398832
Bacillota
TTC
Glu
>WENV181971737
OGZZ01002227
398832
Bacillota
TTC
Glu
>WENV181971667
OGZZ01001642
398832
Bacillota
TTC
Glu
>WENV181971807
OGZZ01003034
118669
Bacillota
GTA
Tyr
>WENV181971496
OGZZ01000550
280476
Bacillota
TTT
Lys
>WENV181971336
OGZZ01000115
280462
Bacillota
GAA
Phe
>WENV181971770
OGZZ01002544
398852
Bacillota
CTC
Glu
>WENV181971460
OGZZ01000409
398852
Bacillota
CTC
Glu
>WENV181971441
OGZZ01000348
398852
Bacillota
CTC
Glu
>WENV181971283
OGZZ01000010
398852
Bacillota
CTC
Glu
>WENV181971450
OGZZ01000373
289123
Bacillota
GGT
Thr
>WENV181971539
OGZZ01000768
321248
Bacillota
TAC
Val
>WENV181971437
OGZZ01000346
280483
Bacillota
GAA
Phe
>WENV181972049
OGZZ01008961
298260
Bacillota
GTT
Asn
>WENV181972132
OGZZ01013520
175857
Bacillota
GTG
His
>WENV181971438
OGZZ01000346
285756
Bacillota
GCC
Gly
>WENV181971836
OGZZ01003443
398833
Bacillota
TGT
Thr
>WENV181972302
OGZZ01035715
175849
Bacillota
GTC
Asp
>WENV181971332
OGZZ01000104
405393
Bacillota
GCC
Gly
>WENV181972021
OGZZ01007975
56074
Bacillota
TGA
Ser
>WENV181971857
OGZZ01003845
56074
Bacillota
TGA
Ser
>WENV181971756
OGZZ01002417
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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