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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
94 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181984182
OHAI01005203
99852
Bacillota
GTA
Tyr
>WENV181983944
OHAI01001889
343590
Bacillota
GCC
Gly
>WENV181984643
OHAI01028603
343590
Bacillota
GCC
Gly
>WENV181983621
OHAI01000244
356775
Bacillota
TGT
Thr
>WENV181984076
OHAI01003504
349107
Bacillota
GCC
Gly
>WENV181983824
OHAI01001015
405363
Bacillota
GCA
Cys
>WENV181984328
OHAI01008576
184537
Bacillota
ACG
Arg
>WENV181984723
OHAI01046229
408526
Bacillota
GCA
Cys
>WENV181984721
OHAI01045564
48505
Bacillota
TGA
Ser
>WENV181983899
OHAI01001656
280466
Bacillota
TAC
Val
>WENV181983916
OHAI01001758
280492
Bacillota
CTT
Lys
>WENV181983661
OHAI01000348
280492
Bacillota
CTT
Lys
>WENV181984309
OHAI01007839
175842
Bacillota
CAC
Val
>WENV181984127
OHAI01004412
236579
Bacillota
GAT
Ile
>WENV181984754
OHAI01056490
184497
Bacillota
GGG
Pro
>WENV181984496
OHAI01015923
179176
Bacillota
ACG
Arg
>WENV181984310
OHAI01007894
20932
Bacillota
GCT
Ser
>WENV181984154
OHAI01004821
352588
Bacillota
CAT
Met
>WENV181984126
OHAI01004412
295166
Bacillota
TGC
Ala
>WENV181984573
OHAI01021633
215243
Bacillota
CAT
Met
>WENV181984066
OHAI01003323
190476
Bacillota
CAT
Met
>WENV181984696
OHAI01040539
482593
Bacillota
CCC
Gly
>WENV181984462
OHAI01014074
20942
Bacillota
GGA
Ser
>WENV181983571
OHAI01000130
73664
Bacillota
CAG
Leu
>WENV181983951
OHAI01001925
280447
Bacillota
GAC
Val
>WENV181983886
OHAI01001569
280447
Bacillota
GAC
Val
>WENV181983807
OHAI01000913
5692
Bacillota
GCT
Ser
>WENV181984439
OHAI01012811
73009
Bacillota
CAG
Leu
>WENV181984367
OHAI01009874
73009
Bacillota
CAG
Leu
>WENV181984261
OHAI01006680
73009
Bacillota
CAG
Leu
>WENV181984058
OHAI01003194
481217
Bacillota
GCA
Cys
>WENV181984574
OHAI01021633
460732
Bacillota
TTC
Glu
>WENV181984133
OHAI01004431
407726
Bacillota
CTG
Gln
>WENV181984106
OHAI01004010
175859
Bacillota
TCT
Arg
>WENV181984038
OHAI01002939
175859
Bacillota
TCT
Arg
>WENV181983721
OHAI01000531
175859
Bacillota
TCT
Arg
>WENV181984659
OHAI01033241
398835
Bacillota
GCC
Gly
>WENV181984188
OHAI01005254
21311
Bacillota
GCT
Ser
>WENV181984479
OHAI01015150
175831
Bacillota
ACG
Arg
>WENV181984459
OHAI01013892
284627
Bacillota
GAA
Phe
>WENV181984170
OHAI01005008
289713
Bacillota
TGT
Thr
>WENV181984692
OHAI01039690
404091
Bacillota
TTG
Gln
>WENV181983652
OHAI01000318
480322
Bacillota
CTG
Gln
>WENV181984087
OHAI01003728
187364
Bacillota
CAT
Met
>WENV181983817
OHAI01000983
401685
Bacillota
TTG
Gln
>WENV181984242
OHAI01006366
175868
Bacillota
GTT
Asn
>WENV181983928
OHAI01001823
175868
Bacillota
GTT
Asn
>WENV181983795
OHAI01000893
175868
Bacillota
GTT
Asn
>WENV181984691
OHAI01039690
289716
Bacillota
GTG
His
>WENV181984241
OHAI01006366
398854
Bacillota
CTC
Glu
>WENV181983883
OHAI01001526
291576
Bacillota
CCC
Gly
>WENV181983823
OHAI01001015
480324
Bacillota
TTG
Gln
>WENV181984051
OHAI01003060
400963
Bacillota
GTT
Asn
>WENV181983635
OHAI01000262
497729
Bacillota
CCA
Trp
>WENV181984432
OHAI01012503
175899
Bacillota
GTC
Asp
>WENV181984348
OHAI01009209
73638
Bacillota
AAG
Leu
>WENV181983570
OHAI01000130
56079
Bacillota
AAG
Leu
>WENV181984739
OHAI01051074
332891
Bacillota
TGC
Ala
>WENV181984625
OHAI01026738
175911
Bacillota
GTC
Asp
>WENV181984637
OHAI01028286
480337
Bacillota
TCC
Gly
>WENV181984688
OHAI01039097
292374
Bacillota
TGC
Ala
>WENV181983947
OHAI01001907
398857
Bacillota
TTC
Glu
>WENV181983579
OHAI01000143
117745
Bacillota
GTA
Tyr
>WENV181984281
OHAI01007195
280444
Bacillota
GGT
Thr
>WENV181984278
OHAI01007195
280444
Bacillota
GGT
Thr
>WENV181983871
OHAI01001465
280444
Bacillota
GGT
Thr
>WENV181984329
OHAI01008576
119459
Bacillota
TAG
Leu
>WENV181984093
OHAI01003765
104114
Bacillota
CAG
Leu
>WENV181984475
OHAI01014687
342104
Bacillota
TAC
Val
>WENV181984176
OHAI01005117
342104
Bacillota
TAC
Val
>WENV181984269
OHAI01006927
179755
Bacillota
CCG
Arg
>WENV181984726
OHAI01047157
280547
Bacillota
GTC
Asp
>WENV181983838
OHAI01001155
46835
Bacillota
TAA
Leu
>WENV181984005
OHAI01002528
330413
Bacillota
CTT
Lys
>WENV181984067
OHAI01003323
398832
Bacillota
TTC
Glu
>WENV181983530
OHAI01000043
280476
Bacillota
TTT
Lys
>WENV181983788
OHAI01000858
280462
Bacillota
GAA
Phe
>WENV181984472
OHAI01014557
398852
Bacillota
CTC
Glu
>WENV181984150
OHAI01004760
398852
Bacillota
CTC
Glu
>WENV181983557
OHAI01000093
398852
Bacillota
CTC
Glu
>WENV181984680
OHAI01036963
118359
Bacillota
GTA
Tyr
>WENV181984687
OHAI01039097
201856
Bacillota
GAT
Ile
>WENV181984636
OHAI01028286
208539
Bacillota
TGG
Pro
>WENV181984737
OHAI01050193
280483
Bacillota
GAA
Phe
>WENV181984165
OHAI01004933
298260
Bacillota
GTT
Asn
>WENV181983816
OHAI01000983
175857
Bacillota
GTG
His
>WENV181983506
OHAI01000010
285756
Bacillota
GCC
Gly
>WENV181983774
OHAI01000810
398833
Bacillota
TGT
Thr
>WENV181984280
OHAI01007195
175849
Bacillota
GTC
Asp
>WENV181983870
OHAI01001465
175849
Bacillota
GTC
Asp
>WENV181983925
OHAI01001814
56074
Bacillota
TGA
Ser
>WENV181983801
OHAI01000906
56074
Bacillota
TGA
Ser
>WENV181984221
OHAI01005946
280473
Bacillota
TGG
Pro
>WENV181983809
OHAI01000920
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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