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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182046553
OHDV01004113
99852
Bacillota
GTA
Tyr
>WENV182046749
OHDV01030216
405363
Bacillota
GCA
Cys
>WENV182046385
OHDV01000902
280428
Bacillota
GAA
Phe
>WENV182046547
OHDV01003975
291579
Bacillota
GAA
Phe
>WENV182046457
OHDV01001900
280466
Bacillota
TAC
Val
>WENV182046484
OHDV01002531
280492
Bacillota
CTT
Lys
>WENV182046565
OHDV01004707
175842
Bacillota
CAC
Val
>WENV182046577
OHDV01005297
295166
Bacillota
TGC
Ala
>WENV182046570
OHDV01005003
73664
Bacillota
CAG
Leu
>WENV182046502
OHDV01002844
280447
Bacillota
GAC
Val
>WENV182046493
OHDV01002734
280447
Bacillota
GAC
Val
>WENV182046505
OHDV01002896
186123
Bacillota
GTC
Asp
>WENV182046527
OHDV01003471
73009
Bacillota
CAG
Leu
>WENV182046496
OHDV01002834
73009
Bacillota
CAG
Leu
>WENV182046647
OHDV01010128
291581
Bacillota
CGG
Pro
>WENV182046452
OHDV01001839
175859
Bacillota
TCT
Arg
>WENV182046627
OHDV01008275
175831
Bacillota
ACG
Arg
>WENV182046546
OHDV01003975
187589
Bacillota
CAT
Met
>WENV182046185
OHDV01000080
179810
Bacillota
TCT
Arg
>WENV182046320
OHDV01000486
284627
Bacillota
GAA
Phe
>WENV182046506
OHDV01002896
291634
Bacillota
GAA
Phe
>WENV182046336
OHDV01000546
294020
Bacillota
TAC
Val
>WENV182046449
OHDV01001823
481760
Bacillota
TCC
Gly
>WENV182046481
OHDV01002452
480322
Bacillota
CTG
Gln
>WENV182046421
OHDV01001248
480322
Bacillota
CTG
Gln
>WENV182046612
OHDV01006736
175868
Bacillota
GTT
Asn
>WENV182046460
OHDV01001900
119278
Bacillota
TAG
Leu
>WENV182046611
OHDV01006736
398854
Bacillota
CTC
Glu
>WENV182046480
OHDV01002431
291576
Bacillota
CCC
Gly
>WENV182046535
OHDV01003725
56079
Bacillota
AAG
Leu
>WENV182046745
OHDV01028922
186051
Bacillota
GAT
Ile
>WENV182046586
OHDV01005906
186051
Bacillota
GAT
Ile
>WENV182046687
OHDV01015368
117745
Bacillota
GTA
Tyr
>WENV182046414
OHDV01001090
280444
Bacillota
GGT
Thr
>WENV182046411
OHDV01001090
280444
Bacillota
GGT
Thr
>WENV182046438
OHDV01001610
179755
Bacillota
CCG
Arg
>WENV182046295
OHDV01000398
46835
Bacillota
TAA
Leu
>WENV182046447
OHDV01001745
398832
Bacillota
TTC
Glu
>WENV182046294
OHDV01000398
175915
Bacillota
GTC
Asp
>WENV182046702
OHDV01019229
294275
Bacillota
TGC
Ala
>WENV182046445
OHDV01001671
280476
Bacillota
TTT
Lys
>WENV182046418
OHDV01001213
398852
Bacillota
CTC
Glu
>WENV182046366
OHDV01000665
289123
Bacillota
GGT
Thr
>WENV182046450
OHDV01001823
184539
Bacillota
TCT
Arg
>WENV182046186
OHDV01000080
175857
Bacillota
GTG
His
>WENV182046676
OHDV01013643
398833
Bacillota
TGT
Thr
>WENV182046413
OHDV01001090
175849
Bacillota
GTC
Asp
>WENV182046188
OHDV01000080
280463
Bacillota
TTT
Lys
>WENV182046681
OHDV01013838
280486
Bacillota
TGC
Ala
>WENV182046251
OHDV01000218
405393
Bacillota
GCC
Gly
>WENV182046488
OHDV01002586
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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