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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182063015
OHEV01017749
99852
Bacillota
GTA
Tyr
>WENV182063070
OHEV01026068
280500
Bacillota
TGC
Ala
>WENV182062974
OHEV01014452
405363
Bacillota
GCA
Cys
>WENV182062908
OHEV01010035
280428
Bacillota
GAA
Phe
>WENV182062568
OHEV01001280
280492
Bacillota
CTT
Lys
>WENV182062622
OHEV01001708
175842
Bacillota
CAC
Val
>WENV182062858
OHEV01007055
179563
Bacillota
GAT
Ile
>WENV182063096
OHEV01029877
295166
Bacillota
TGC
Ala
>WENV182062857
OHEV01007055
295166
Bacillota
TGC
Ala
>WENV182062811
OHEV01005692
190476
Bacillota
CAT
Met
>WENV182062955
OHEV01012157
73664
Bacillota
CAG
Leu
>WENV182062836
OHEV01006199
5692
Bacillota
GCT
Ser
>WENV182062883
OHEV01008157
175825
Bacillota
GAT
Ile
>WENV182062534
OHEV01000889
73009
Bacillota
CAG
Leu
>WENV182062663
OHEV01002284
189473
Bacillota
GAT
Ile
>WENV182062782
OHEV01004725
291581
Bacillota
CGG
Pro
>WENV182063037
OHEV01021406
175859
Bacillota
TCT
Arg
>WENV182062882
OHEV01008157
280436
Bacillota
TGC
Ala
>WENV182062870
OHEV01007670
175831
Bacillota
ACG
Arg
>WENV182062336
OHEV01000052
294020
Bacillota
TAC
Val
>WENV182062767
OHEV01004268
480322
Bacillota
CTG
Gln
>WENV182062789
OHEV01004905
175868
Bacillota
GTT
Asn
>WENV182062596
OHEV01001459
322848
Bacillota
CTT
Lys
>WENV182062788
OHEV01004905
398854
Bacillota
CTC
Glu
>WENV182062781
OHEV01004711
291576
Bacillota
CCC
Gly
>WENV182062702
OHEV01002814
480324
Bacillota
TTG
Gln
>WENV182062954
OHEV01012157
56079
Bacillota
AAG
Leu
>WENV182063175
OHEV01049861
186051
Bacillota
GAT
Ile
>WENV182062420
OHEV01000278
117745
Bacillota
GTA
Tyr
>WENV182062817
OHEV01005758
280444
Bacillota
GGT
Thr
>WENV182062399
OHEV01000169
281445
Bacillota
GTG
His
>WENV182062919
OHEV01010413
179755
Bacillota
CCG
Arg
>WENV182063042
OHEV01022113
58120
Bacillota
AAG
Leu
>WENV182063135
OHEV01039568
46835
Bacillota
TAA
Leu
>WENV182062812
OHEV01005692
398832
Bacillota
TTC
Glu
>WENV182062658
OHEV01002128
118669
Bacillota
GTA
Tyr
>WENV182062523
OHEV01000819
280462
Bacillota
GAA
Phe
>WENV182062656
OHEV01002117
398852
Bacillota
CTC
Glu
>WENV182062470
OHEV01000450
398852
Bacillota
CTC
Glu
>WENV182062421
OHEV01000278
398852
Bacillota
CTC
Glu
>WENV182062350
OHEV01000076
321248
Bacillota
TAC
Val
>WENV182062325
OHEV01000029
406186
Bacillota
CTC
Glu
>WENV182063076
OHEV01027560
398833
Bacillota
TGT
Thr
>WENV182062958
OHEV01012282
175849
Bacillota
GTC
Asp
>WENV182062524
OHEV01000819
280463
Bacillota
TTT
Lys
>WENV182062835
OHEV01006199
56074
Bacillota
TGA
Ser
>WENV182062799
OHEV01005200
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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