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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182107845
OHIL01000582
290391
Bacillota
TAC
Val
>WENV182108260
OHIL01013906
405357
Bacillota
TTC
Glu
>WENV182107942
OHIL01001397
280492
Bacillota
CTT
Lys
>WENV182108146
OHIL01006717
73664
Bacillota
CAG
Leu
>WENV182108345
OHIL01023852
186123
Bacillota
GTC
Asp
>WENV182107993
OHIL01002248
398835
Bacillota
GCC
Gly
>WENV182108346
OHIL01023852
291634
Bacillota
GAA
Phe
>WENV182107978
OHIL01002060
303718
Bacillota
TGT
Thr
>WENV182107821
OHIL01000500
56079
Bacillota
AAG
Leu
>WENV182108150
OHIL01006859
323864
Bacillota
TGC
Ala
>WENV182108017
OHIL01003044
117745
Bacillota
GTA
Tyr
>WENV182108213
OHIL01010558
46643
Bacillota
TGA
Ser
>WENV182107826
OHIL01000511
281445
Bacillota
GTG
His
>WENV182108344
OHIL01023778
179755
Bacillota
CCG
Arg
>WENV182108265
OHIL01014714
46835
Bacillota
TAA
Leu
>WENV182108151
OHIL01006878
280462
Bacillota
GAA
Phe
>WENV182107849
OHIL01000587
398852
Bacillota
CTC
Glu
>WENV182108440
OHIL01039356
289123
Bacillota
GGT
Thr
>WENV182107848
OHIL01000582
285756
Bacillota
GCC
Gly
>WENV182108467
OHIL01046779
398833
Bacillota
TGT
Thr
>WENV182108307
OHIL01018685
317820
Bacillota
TAC
Val
>WENV182108152
OHIL01006878
280463
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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