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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182143752
OHKV01020037
510477
Bacillota
TCC
Gly
>WENV182143410
OHKV01001127
99852
Bacillota
GTA
Tyr
>WENV182143874
OHKV01041322
343590
Bacillota
GCC
Gly
>WENV182143312
OHKV01000423
356775
Bacillota
TGT
Thr
>WENV182143881
OHKV01044534
280500
Bacillota
TGC
Ala
>WENV182143642
OHKV01008287
405363
Bacillota
GCA
Cys
>WENV182143141
OHKV01000078
179917
Bacillota
CAT
Met
>WENV182143142
OHKV01000078
302145
Bacillota
GAA
Phe
>WENV182143105
OHKV01000042
280492
Bacillota
CTT
Lys
>WENV182143402
OHKV01001019
175842
Bacillota
CAC
Val
>WENV182143640
OHKV01008102
179176
Bacillota
ACG
Arg
>WENV182143084
OHKV01000023
295166
Bacillota
TGC
Ala
>WENV182143437
OHKV01001463
190476
Bacillota
CAT
Met
>WENV182143431
OHKV01001408
190476
Bacillota
CAT
Met
>WENV182143380
OHKV01000787
73664
Bacillota
CAG
Leu
>WENV182143567
OHKV01004451
280447
Bacillota
GAC
Val
>WENV182143427
OHKV01001331
280447
Bacillota
GAC
Val
>WENV182143569
OHKV01004464
5692
Bacillota
GCT
Ser
>WENV182143522
OHKV01002934
186123
Bacillota
GTC
Asp
>WENV182143821
OHKV01030281
175825
Bacillota
GAT
Ile
>WENV182143423
OHKV01001297
73009
Bacillota
CAG
Leu
>WENV182143831
OHKV01031660
291581
Bacillota
CGG
Pro
>WENV182143415
OHKV01001226
175859
Bacillota
TCT
Arg
>WENV182143820
OHKV01030281
280436
Bacillota
TGC
Ala
>WENV182143420
OHKV01001257
175831
Bacillota
ACG
Arg
>WENV182143615
OHKV01006449
291634
Bacillota
GAA
Phe
>WENV182143835
OHKV01032442
27216
Bacillota
GCT
Ser
>WENV182143830
OHKV01031660
480322
Bacillota
CTG
Gln
>WENV182143509
OHKV01002563
175868
Bacillota
GTT
Asn
>WENV182143428
OHKV01001341
291576
Bacillota
CCC
Gly
>WENV182143859
OHKV01037524
480324
Bacillota
TTG
Gln
>WENV182143299
OHKV01000398
497729
Bacillota
CCA
Trp
>WENV182143700
OHKV01014280
303718
Bacillota
TGT
Thr
>WENV182143379
OHKV01000787
56079
Bacillota
AAG
Leu
>WENV182143116
OHKV01000058
56079
Bacillota
AAG
Leu
>WENV182143073
OHKV01000016
398857
Bacillota
TTC
Glu
>WENV182143198
OHKV01000160
117745
Bacillota
GTA
Tyr
>WENV182143495
OHKV01002268
280444
Bacillota
GGT
Thr
>WENV182143132
OHKV01000069
46643
Bacillota
TGA
Ser
>WENV182143106
OHKV01000044
281445
Bacillota
GTG
His
>WENV182143439
OHKV01001473
179755
Bacillota
CCG
Arg
>WENV182143438
OHKV01001463
398832
Bacillota
TTC
Glu
>WENV182143432
OHKV01001408
398832
Bacillota
TTC
Glu
>WENV182143578
OHKV01004760
118669
Bacillota
GTA
Tyr
>WENV182143133
OHKV01000069
280462
Bacillota
GAA
Phe
>WENV182143612
OHKV01006382
398852
Bacillota
CTC
Glu
>WENV182143589
OHKV01005224
398852
Bacillota
CTC
Glu
>WENV182143357
OHKV01000627
398852
Bacillota
CTC
Glu
>WENV182143315
OHKV01000431
398852
Bacillota
CTC
Glu
>WENV182143199
OHKV01000160
398852
Bacillota
CTC
Glu
>WENV182143111
OHKV01000051
398852
Bacillota
CTC
Glu
>WENV182143486
OHKV01002042
289123
Bacillota
GGT
Thr
>WENV182143753
OHKV01020037
184539
Bacillota
TCT
Arg
>WENV182143643
OHKV01008327
398833
Bacillota
TGT
Thr
>WENV182143134
OHKV01000069
280463
Bacillota
TTT
Lys
>WENV182143368
OHKV01000715
489283
Bacillota
GCA
Cys
>WENV182143523
OHKV01002934
405393
Bacillota
GCC
Gly
>WENV182143568
OHKV01004464
56074
Bacillota
TGA
Ser
>WENV182143654
OHKV01009221
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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