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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182151988
OHLK01008975
280500
Bacillota
TGC
Ala
>WENV182151933
OHLK01004709
280428
Bacillota
GAA
Phe
>WENV182151908
OHLK01003340
280447
Bacillota
GAC
Val
>WENV182151994
OHLK01009501
5692
Bacillota
GCT
Ser
>WENV182151829
OHLK01001097
186123
Bacillota
GTC
Asp
>WENV182151986
OHLK01008796
73009
Bacillota
CAG
Leu
>WENV182151984
OHLK01008796
175859
Bacillota
TCT
Arg
>WENV182151857
OHLK01001832
175831
Bacillota
ACG
Arg
>WENV182151848
OHLK01001751
187589
Bacillota
CAT
Met
>WENV182151830
OHLK01001097
291634
Bacillota
GAA
Phe
>WENV182151955
OHLK01005973
294020
Bacillota
TAC
Val
>WENV182152043
OHLK01016570
175868
Bacillota
GTT
Asn
>WENV182152015
OHLK01011978
398854
Bacillota
CTC
Glu
>WENV182151975
OHLK01008229
480324
Bacillota
TTG
Gln
>WENV182151846
OHLK01001751
303718
Bacillota
TGT
Thr
>WENV182151798
OHLK01000430
289745
Bacillota
TTT
Lys
>WENV182151990
OHLK01009110
281445
Bacillota
GTG
His
>WENV182151935
OHLK01004716
179755
Bacillota
CCG
Arg
>WENV182151902
OHLK01003207
280476
Bacillota
TTT
Lys
>WENV182151875
OHLK01002467
175857
Bacillota
GTG
His
>WENV182151932
OHLK01004709
175849
Bacillota
GTC
Asp
>WENV182151816
OHLK01000739
405393
Bacillota
GCC
Gly
>WENV182151993
OHLK01009501
56074
Bacillota
TGA
Ser
>WENV182151992
OHLK01009331
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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